RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 TMTC3Q6ZXV5 915 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 PIBF1Q8WXW3 757 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 ATG4CQ96DT6 458 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 MAP3K14Q99558 947 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 VAT1LQ9HCJ6 419 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 PPP1R9AQ9ULJ8 1098 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 SLC45A1Q9Y2W3 748 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 SPDYE16A6NNV3 312 aaPredicted RBP15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 PPFIA3O75145 1194 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 HOXA7P31268 230 aaPredicted RBP15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 ADD1P35611 737 aaKnown RBP15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 MCM2P49736 904 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 GNAQP50148 359 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 HERVK_113P62684 666 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 CCDC174Q6PII3 467 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 CCDC83Q8IWF9 413 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 HSCBQ8IWL3 235 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 CHURC1Q8WUH1 139 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 P2RX7Q99572 595 aaKnown RBP15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 PAGR1Q9BTK6 254 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 PRR12Q9ULL5 1215 aa15.77■□□□□ 0.12
TM9SF4-204ENST00000442842 CCDC196A0A1B0GTZ2 297 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 CPLX1O14810 134 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 PFKFB2O60825 505 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 DSG3P32926 999 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 COG2Q14746 738 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 NBPF11Q86T75 865 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 ADGRF4Q8IZF3 695 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 SRBD1Q8N5C6 995 aaKnown RBP15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
TM9SF4-204ENST00000442842 MYPNQ86TC9 1320 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 CNTNAP5Q8WYK1 1306 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 PEX10O60683 326 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 DTNBO60941 627 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 ZBED4O75132 1171 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 ALDH1A1P00352 501 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 SLC4A3P48751 1232 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 CRHR2Q13324 411 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 CDC37Q16543 378 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 PRPF38AQ8NAV1 312 aaKnown RBP15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 ZSCAN31Q96LW9 406 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 SH2B1Q9NRF2 756 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-204ENST00000442842 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 PLA2G6O60733 806 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 ST3GAL1Q11201 340 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 PLS1Q14651 629 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 SLC35G1Q2M3R5 365 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 CPLX2Q6PUV4 134 aaKnown RBP15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 PHKBQ93100 1093 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 TMX3Q96JJ7 454 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 PIGSQ96S52 555 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 LZTS2Q9BRK4 669 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 RNF186Q9NXI6 227 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 HOXC10Q9NYD6 342 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 CPA4Q9UI42 421 aa15.74■□□□□ 0.11
TM9SF4-204ENST00000442842 K7ELQ4 463 aaPredicted RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 VWA5AO00534 786 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 CYTH3O43739 400 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 TRPA1O75762 1119 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 ECM2O94769 699 aaPredicted RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 PPP2R5BQ15173 497 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 CPXCR1Q8N123 301 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 ANKRD13CQ8N6S4 541 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 DNAJC5GQ8N7S2 189 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 RRP36Q96EU6 259 aaKnown RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 RANBP17Q9H2T7 1088 aaKnown RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 JMJD4Q9H9V9 463 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 RAVER2Q9HCJ3 691 aaKnown RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 A0A0G2JMZ2 1700 aa15.73■□□□□ 0.11
TM9SF4-204ENST00000442842 CA12O43570 354 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 CNMDO75829 334 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 CDKL5O76039 1030 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 TBC1D8O95759 1140 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 AKAP17AQ02040 695 aaKnown RBP15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 MAP2K1Q02750 393 aaPredicted RBP15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 TMEM132BQ14DG7 1078 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 QRICH1Q2TAL8 776 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 USH1GQ495M9 461 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 GTF3C2Q8WUA4 911 aaPredicted RBP15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 SNX21Q969T3 373 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 BTBD7Q9P203 1132 aa15.72■□□□□ 0.11
TM9SF4-204ENST00000442842 ADGRA2Q96PE1 1338 aa15.71■□□□□ 0.11
TM9SF4-204ENST00000442842 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
TM9SF4-204ENST00000442842 JAK2O60674 1132 aa15.71■□□□□ 0.11
TM9SF4-204ENST00000442842 GCLCP48506 637 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms