RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.54■■□□□ 1.52
TMEM50B-204ENST00000442441 TEX13BQ9BXU2 312 aa24.54■■□□□ 1.52
TMEM50B-204ENST00000442441 FAM184BQ9ULE4 1060 aa24.54■■□□□ 1.52
TMEM50B-204ENST00000442441 SYNGAP1Q96PV0 1343 aa24.54■■□□□ 1.52
TMEM50B-204ENST00000442441 SYNRGQ9UMZ2 1314 aa24.54■■□□□ 1.52
TMEM50B-204ENST00000442441 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.53■■□□□ 1.52
TMEM50B-204ENST00000442441 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.53■■□□□ 1.52
TMEM50B-204ENST00000442441 MOXD2PA6NHM9 499 aa24.53■■□□□ 1.52
TMEM50B-204ENST00000442441 KLHDC9Q8NEP7 349 aa24.53■■□□□ 1.52
TMEM50B-204ENST00000442441 SLF1Q9BQI6 1058 aa24.53■■□□□ 1.52
TMEM50B-204ENST00000442441 SNAI1O95863 264 aaPredicted RBP24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 MS4A1P11836 297 aa24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 DNAJB2P25686 324 aa24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 GRIN2CQ14957 1233 aa24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 KCNA10Q16322 511 aa24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 SNRNP48Q6IEG0 339 aaKnown RBP24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 CCSAPQ6IQ19 270 aaPredicted RBP24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 MAMDC4Q6UXC1 1216 aa24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 SYMPKQ92797 1274 aaKnown RBP24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 DDX11Q96FC9 970 aa24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 NUP88Q99567 741 aaPredicted RBP24.52■■□□□ 1.52
TMEM50B-204ENST00000442441 TIMP1P01033 207 aa24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 ZSCAN25Q6NSZ9 544 aa24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 PUS7LQ9H0K6 701 aaKnown RBP24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 PRDM6Q9NQX0 595 aa24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 ARPP21Q9UBL0 812 aaPredicted RBP24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 ZHX1Q9UKY1 873 aaPredicted RBP24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 RIPK3Q9Y572 518 aa24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 MYH7P12883 1935 aa24.51■■□□□ 1.51
TMEM50B-204ENST00000442441 DNAJC25-GNG10A0A024R161 153 aa24.5■■□□□ 1.51
TMEM50B-204ENST00000442441 DUSP11O75319 330 aaKnown RBP24.5■■□□□ 1.51
TMEM50B-204ENST00000442441 ZBTB40Q9NUA8 1239 aa24.5■■□□□ 1.51
TMEM50B-204ENST00000442441 TBX21Q9UL17 535 aa24.5■■□□□ 1.51
TMEM50B-204ENST00000442441 GREB1LQ9C091 1923 aaPredicted RBP24.5■■□□□ 1.51
TMEM50B-204ENST00000442441 F5H6K3 240 aa24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 KLRC3Q07444 240 aa24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 ZNF467Q7Z7K2 595 aaPredicted RBP24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 PRPF38AQ8NAV1 312 aaKnown RBP24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 GLT1D1Q96MS3 346 aa24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.49■■□□□ 1.516e-15■□□□□ 8.9
TMEM50B-204ENST00000442441 ZNF576Q9H609 170 aa24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 NYAP2Q9P242 653 aa24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 ELP1O95163 1332 aa24.49■■□□□ 1.51
TMEM50B-204ENST00000442441 MYADML2A6NDP7 307 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 ATP2A1O14983 1001 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 NDUFB10O96000 172 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 RASA1P20936 1047 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 CST5P28325 142 aaPredicted RBP24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 SBK1Q52WX2 424 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 MROH7Q68CQ1 1323 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 MFSD5Q6N075 450 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 TIFAQ96CG3 184 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 DDX19BQ9UMR2 479 aa24.48■■□□□ 1.51
TMEM50B-204ENST00000442441 ZBED4O75132 1171 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 SLC4A3P48751 1232 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 CDK7P50613 346 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 ACVR2BQ13705 512 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 CPXCR1Q8N123 301 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 USP38Q8NB14 1042 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 PCSK9Q8NBP7 692 aaKnown RBP24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 STRBPQ96SI9 672 aaKnown RBP24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 MKNK2Q9HBH9 465 aa24.47■■□□□ 1.51
TMEM50B-204ENST00000442441 C6orf222P0C671 652 aaPredicted RBP24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 PPIGQ13427 754 aaKnown RBP eCLIP24.46■■□□□ 1.519e-7■■■□□ 18.9
TMEM50B-204ENST00000442441 CCDC174Q6PII3 467 aa24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 ABHD16BQ9H3Z7 469 aa24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 SPC25Q9HBM1 224 aa24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 COG6Q9Y2V7 657 aa24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 CTDP1Q9Y5B0 961 aaPredicted RBP24.46■■□□□ 1.51
TMEM50B-204ENST00000442441 ASGR1P07306 291 aa24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 IRX5P78411 483 aaPredicted RBP24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 TJAP1Q5JTD0 557 aa24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 C16orf59Q7L2K0 433 aa24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 STK11IPQ8N1F8 1099 aa24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 UPF3AQ9H1J1 476 aaKnown RBP24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 CLIP2Q9UDT6 1046 aa24.45■■□□□ 1.5
TMEM50B-204ENST00000442441 GSG1L2A8MUP6 293 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 ADCY6O43306 1168 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 GJA9P57773 515 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 CCDC144BQ3MJ40 725 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 TMEM240Q5SV17 173 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 GIMAP6Q6P9H5 292 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 ANKRD35Q8N283 1001 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 VTI1AQ96AJ9 217 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 SLC38A10Q9HBR0 1119 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 RAVER2Q9HCJ3 691 aaKnown RBP24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 MUC3AQ02505 3323 aa24.44■■□□□ 1.5
TMEM50B-204ENST00000442441 A0A0U1RQG5 324 aaPredicted RBP24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 MINDY4BA8MYZ0 360 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 ARVCFO00192 962 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 GNASQ5JWF2 1037 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 RASIP1Q5U651 963 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 TMEM199Q8N511 208 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 KIFC2Q96AC6 838 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 FGD4Q96M96 766 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 FBXO40Q9UH90 709 aa24.43■■□□□ 1.5
TMEM50B-204ENST00000442441 MCM3APO60318 1980 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 IGKV6D-41A0A0C4DH26 115 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms