RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
GACAT3-202ENST00000442387 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 DCDC2CA8MYV0 355 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 F5H6K3 240 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 RASA1P20936 1047 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 ACLYP53396 1101 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 KLRC3Q07444 240 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 FAAP100Q0VG06 881 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
GACAT3-202ENST00000442387 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
GACAT3-202ENST00000442387 CTDP1Q9Y5B0 961 aaPredicted RBP13.15□□□□□ -0.3
GACAT3-202ENST00000442387 SPTBN5Q9NRC6 3674 aaKnown RBP13.15□□□□□ -0.31
GACAT3-202ENST00000442387 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 ZBED4O75132 1171 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 SNAI1O95863 264 aaPredicted RBP13.14□□□□□ -0.31
GACAT3-202ENST00000442387 NDUFB10O96000 172 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 KCNA10Q16322 511 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 KLHDC9Q8NEP7 349 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 STRBPQ96SI9 672 aaKnown RBP13.14□□□□□ -0.31
GACAT3-202ENST00000442387 VCANP13611 3396 aa13.14□□□□□ -0.31
GACAT3-202ENST00000442387 CDH23Q9H251 3354 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.13□□□□□ -0.31
GACAT3-202ENST00000442387 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.13□□□□□ -0.31
GACAT3-202ENST00000442387 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
GACAT3-202ENST00000442387 TIMP1P01033 207 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 CCSAPQ6IQ19 270 aaPredicted RBP13.13□□□□□ -0.31
GACAT3-202ENST00000442387 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
GACAT3-202ENST00000442387 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 GLT1D1Q96MS3 346 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
GACAT3-202ENST00000442387 MYH8P13535 1937 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 MYADML2A6NDP7 307 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 DNAJB2P25686 324 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 ZNF287Q9HBT7 754 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-202ENST00000442387 FBXO40Q9UH90 709 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 TBX21Q9UL17 535 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 ELP1O95163 1332 aa13.12□□□□□ -0.31
GACAT3-202ENST00000442387 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
GACAT3-202ENST00000442387 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
GACAT3-202ENST00000442387 ASGR1P07306 291 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 TDO2P48775 406 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 GRIN2CQ14957 1233 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 MFSD5Q6N075 450 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 CCDC174Q6PII3 467 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 CHST13Q8NET6 341 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 APPBP2Q92624 585 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 OSBP2Q969R2 916 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.11□□□□□ -0.31
GACAT3-202ENST00000442387 ABHD16BQ9H3Z7 469 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
GACAT3-202ENST00000442387 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
GACAT3-202ENST00000442387 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
GACAT3-202ENST00000442387 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
GACAT3-202ENST00000442387 ADCY6O43306 1168 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 PRDM1O75626 825 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 GNAT2P19087 354 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 CDK7P50613 346 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 OAZ1P54368 228 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 GJA9P57773 515 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
GACAT3-202ENST00000442387 PPIGQ13427 754 aaKnown RBP eCLIP13.1□□□□□ -0.31
GACAT3-202ENST00000442387 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
GACAT3-202ENST00000442387 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms