RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 POLA2Q14181 598 aa22.39■■□□□ 1.17
HDLBP-218ENST00000441124 CCSAPQ6IQ19 270 aaPredicted RBP22.39■■□□□ 1.17
HDLBP-218ENST00000441124 OTOP2Q7RTS6 562 aa22.39■■□□□ 1.17
HDLBP-218ENST00000441124 SIAH1Q8IUQ4 282 aa22.39■■□□□ 1.17
HDLBP-218ENST00000441124 TRMT2AQ8IZ69 625 aaKnown RBP22.39■■□□□ 1.17
HDLBP-218ENST00000441124 PCSK9Q8NBP7 692 aaKnown RBP22.39■■□□□ 1.17
HDLBP-218ENST00000441124 HERVK_113Q902F9 699 aa22.39■■□□□ 1.17
HDLBP-218ENST00000441124 DDX11Q96FC9 970 aa22.39■■□□□ 1.17
HDLBP-218ENST00000441124 PLXNA1Q9UIW2 1896 aa22.39■■□□□ 1.17
HDLBP-218ENST00000441124 VWA5AO00534 786 aa22.38■■□□□ 1.17
HDLBP-218ENST00000441124 DUSP11O75319 330 aaKnown RBP22.38■■□□□ 1.17
HDLBP-218ENST00000441124 SNAI1O95863 264 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-218ENST00000441124 TRIM27P14373 513 aa22.38■■□□□ 1.17
HDLBP-218ENST00000441124 RABGGTBP53611 331 aa22.38■■□□□ 1.17
HDLBP-218ENST00000441124 AAK1Q2M2I8 961 aa22.38■■□□□ 1.17
HDLBP-218ENST00000441124 PPP2R2DQ66LE6 453 aa22.38■■□□□ 1.17
HDLBP-218ENST00000441124 EAF2Q96CJ1 260 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-218ENST00000441124 SWAP70Q9UH65 585 aa22.38■■□□□ 1.17
HDLBP-218ENST00000441124 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
HDLBP-218ENST00000441124 COPB2P35606 906 aa22.37■■□□□ 1.17
HDLBP-218ENST00000441124 GNASQ5JWF2 1037 aa22.37■■□□□ 1.17
HDLBP-218ENST00000441124 LRFN3Q9BTN0 628 aa22.37■■□□□ 1.17
HDLBP-218ENST00000441124 C1orf115Q9H7X2 142 aa22.37■■□□□ 1.17
HDLBP-218ENST00000441124 NCOR1O75376 2440 aa22.37■■□□□ 1.17
HDLBP-218ENST00000441124 FAM83BQ5T0W9 1011 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 FAM126BQ8IXS8 530 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 SSH3Q8TE77 659 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 EPHX3Q9H6B9 360 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 DCP1AQ9NPI6 582 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-218ENST00000441124 ZNF214Q9UL59 606 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-218ENST00000441124 PPP1R9AQ9ULJ8 1098 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 ADAMTS5Q9UNA0 930 aa22.36■■□□□ 1.17
HDLBP-218ENST00000441124 SYNGAP1Q96PV0 1343 aa22.35■■□□□ 1.17
HDLBP-218ENST00000441124 MYO9BQ13459 2157 aa22.35■■□□□ 1.17
HDLBP-218ENST00000441124 EEF2P13639 858 aaKnown RBP22.35■■□□□ 1.17
HDLBP-218ENST00000441124 MYOGP15173 224 aa22.35■■□□□ 1.17
HDLBP-218ENST00000441124 PDE6AP16499 860 aa22.35■■□□□ 1.17
HDLBP-218ENST00000441124 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
HDLBP-218ENST00000441124 ATP8B2P98198 1209 aa22.35■■□□□ 1.17
HDLBP-218ENST00000441124 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
HDLBP-218ENST00000441124 TMED8Q6PL24 325 aaPredicted RBP22.35■■□□□ 1.17
HDLBP-218ENST00000441124 MSL3Q8N5Y2 521 aaKnown RBP22.35■■□□□ 1.17
HDLBP-218ENST00000441124 ZBBXA8MT70 800 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 ADCY6O43306 1168 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 CCL23P55773 120 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 SNRNP48Q6IEG0 339 aaKnown RBP22.34■■□□□ 1.17
HDLBP-218ENST00000441124 LCORLQ8N3X6 602 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 HIPK3Q9H422 1215 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 GOPCQ9HD26 462 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
HDLBP-218ENST00000441124 CHD9Q3L8U1 2897 aa22.34■■□□□ 1.17
HDLBP-218ENST00000441124 UMODL1Q5DID0 1318 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 ZNF532Q9HCE3 1301 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 NAV1Q8NEY1 1877 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 CCDC144BQ3MJ40 725 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 TMEM31Q5JXX7 168 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 NOL8Q76FK4 1167 aaKnown RBP22.33■■□□□ 1.17
HDLBP-218ENST00000441124 AACSQ86V21 672 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 CTDP1Q9Y5B0 961 aaPredicted RBP22.33■■□□□ 1.17
HDLBP-218ENST00000441124 SLC4A7Q9Y6M7 1214 aa22.33■■□□□ 1.17
HDLBP-218ENST00000441124 GJA9P57773 515 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 BEX3Q00994 111 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 TTF1Q15361 905 aaPredicted RBP22.32■■□□□ 1.16
HDLBP-218ENST00000441124 MAMDC4Q6UXC1 1216 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 TMEM57Q8N5G2 664 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 REPS2Q8NFH8 660 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 CCDC17Q96LX7 622 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 NUP88Q99567 741 aaPredicted RBP22.32■■□□□ 1.16
HDLBP-218ENST00000441124 TEX13BQ9BXU2 312 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 ARMT1Q9H993 441 aa22.32■■□□□ 1.16
HDLBP-218ENST00000441124 TCF20Q9UGU0 1960 aaKnown RBP22.31■■□□□ 1.16
HDLBP-218ENST00000441124 CYP2D7A0A087X1C5 515 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 RFXAPO00287 272 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 GTPBP6O43824 516 aaPredicted RBP22.31■■□□□ 1.16
HDLBP-218ENST00000441124 CDK8P49336 464 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 CPXCR1Q8N123 301 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 SLF1Q9BQI6 1058 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 UPF3AQ9H1J1 476 aaKnown RBP22.31■■□□□ 1.16
HDLBP-218ENST00000441124 CERS4Q9HA82 394 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 RIPK3Q9Y572 518 aa22.31■■□□□ 1.16
HDLBP-218ENST00000441124 ZNFX1Q9P2E3 1918 aaKnown RBP22.3■■□□□ 1.16
HDLBP-218ENST00000441124 SMIM22K7EJ46 135 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 ERC2O15083 957 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 PRKAB2O43741 272 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 CXCL17Q6UXB2 119 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 AMOTL1Q8IY63 956 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
HDLBP-218ENST00000441124 BCL11AQ9H165 835 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 KANSL2Q9H9L4 492 aa22.3■■□□□ 1.16
HDLBP-218ENST00000441124 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
HDLBP-218ENST00000441124 CD4P01730 458 aa22.29■■□□□ 1.16
HDLBP-218ENST00000441124 ANKRD35Q8N283 1001 aa22.29■■□□□ 1.16
HDLBP-218ENST00000441124 PCDHA11Q9Y5I1 949 aa22.29■■□□□ 1.16
HDLBP-218ENST00000441124 DNAJC25-GNG10A0A024R161 153 aa22.28■■□□□ 1.16
HDLBP-218ENST00000441124 FAM86C2PA6NEL3 165 aa22.28■■□□□ 1.16
HDLBP-218ENST00000441124 GOLIM4O00461 696 aa22.28■■□□□ 1.16
HDLBP-218ENST00000441124 ATP2A2P16615 1042 aaKnown RBP22.28■■□□□ 1.16
HDLBP-218ENST00000441124 ARMCX2Q7L311 632 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms