RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 XPNPEP3Q9NQH7 507 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 FEM1BQ9UK73 627 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 ZNF865P0CJ78 1059 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 SNX17Q15036 470 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 RNF180Q86T96 592 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 GMCL1P1Q8NEA9 526 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 FERMT2Q96AC1 680 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 KIFC2Q96AC6 838 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 NAPBQ9H115 298 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 SLC38A10Q9HBR0 1119 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 PHF24Q9UPV7 400 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 RIPK3Q9Y572 518 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 PARP14Q460N5 1801 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 SYNGAP1Q96PV0 1343 aa13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 ZNFX1Q9P2E3 1918 aaKnown RBP13.84□□□□□ -0.19
UBE2D4-204ENST00000440899 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 PGK1P00558 417 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 FDX1P10109 184 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 AKR1A1P14550 325 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 MX1P20591 662 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 TRIM60Q495X7 471 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 MAMDC4Q6UXC1 1216 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 Q7L0L9 218 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 CPXCR1Q8N123 301 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 MTMR10Q9NXD2 777 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 FBXO40Q9UH90 709 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 PLIN4Q96Q06 1357 aa13.83□□□□□ -0.2
UBE2D4-204ENST00000440899 SMCHD1A6NHR9 2005 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 BMP3P12645 472 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 OAZ1P54368 228 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 TFAP4Q01664 338 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 PPARAQ07869 468 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 SLFN13Q68D06 897 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 ZNF467Q7Z7K2 595 aaPredicted RBP13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 LRRC47Q8N1G4 583 aaKnown RBP13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 ANKRD35Q8N283 1001 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 CHST13Q8NET6 341 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 CHURC1Q8WUH1 139 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 TSEN34Q9BSV6 310 aaKnown RBP13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 RAVER2Q9HCJ3 691 aaKnown RBP13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 PDLIM7Q9NR12 457 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 FAM184BQ9ULE4 1060 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
UBE2D4-204ENST00000440899 SNAI1O95863 264 aaPredicted RBP13.81□□□□□ -0.2
UBE2D4-204ENST00000440899 RRP1P56182 461 aaKnown RBP13.81□□□□□ -0.2
UBE2D4-204ENST00000440899 TLE2Q04725 743 aa13.81□□□□□ -0.2
UBE2D4-204ENST00000440899 ANKRD45Q5TZF3 282 aa13.81□□□□□ -0.2
UBE2D4-204ENST00000440899 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
UBE2D4-204ENST00000440899 STXBP5LQ9Y2K9 1186 aa13.81□□□□□ -0.2
UBE2D4-204ENST00000440899 A0A1W2PQ45 241 aaPredicted RBP13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 A0A1W2PQY0 241 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 TMEM232C9JQI7 657 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 POTEB2H3BUK9 544 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 ADAMTS4O75173 837 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 STAT2P52630 851 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 FAM160B2Q86V87 743 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 BADQ92934 168 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 TRIM43Q96BQ3 446 aaPredicted RBP13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 GMCL1Q96IK5 515 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 SALL3Q9BXA9 1300 aa13.8□□□□□ -0.2
UBE2D4-204ENST00000440899 PLA2G6O60733 806 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 DUSP11O75319 330 aaKnown RBP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 MCCP23508 829 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 SLC1A4P43007 532 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 IKQ13123 557 aaPredicted RBP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 ACVR2BQ13705 512 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 SHHQ15465 462 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 CCDC129Q6ZRS4 1044 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 LENG1Q96BZ8 264 aaPredicted RBP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 EVI5LQ96CN4 794 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
UBE2D4-204ENST00000440899 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 MOXD2PA6NHM9 499 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 FOXP2O15409 715 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 CLTBP09497 229 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 ACLYP53396 1101 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms