RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 CTAGE5O15320 804 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 USP2O75604 605 aaPredicted RBP24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 PKN1Q16512 942 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 OTUD7BQ6GQQ9 843 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 CCDC73Q6ZRK6 1079 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 KCTD1Q719H9 257 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 PIBF1Q8WXW3 757 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 SPZ1Q9BXG8 430 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 UBA5Q9GZZ9 404 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 GJB4Q9NTQ9 266 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 POLR3EQ9NVU0 708 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 CYTH3O43739 400 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 NDUFB10O96000 172 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 XBP1P17861 261 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 GNL2Q13823 731 aaKnown RBP24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 CCDC84Q86UT8 332 aaPredicted RBP24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 GMCL1Q96IK5 515 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 GLIS2Q9BZE0 524 aaPredicted RBP24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 CPVLQ9H3G5 476 aa24.61■■□□□ 1.53
CDKN1C-204ENST00000440480 ME1P48163 572 aa24.6■■□□□ 1.53
CDKN1C-204ENST00000440480 KIF23Q02241 960 aaPredicted RBP24.6■■□□□ 1.53
CDKN1C-204ENST00000440480 SF3A1Q15459 793 aaKnown RBP24.6■■□□□ 1.53
CDKN1C-204ENST00000440480 CDCA5Q96FF9 252 aa24.6■■□□□ 1.53
CDKN1C-204ENST00000440480 VAT1LQ9HCJ6 419 aa24.6■■□□□ 1.53
CDKN1C-204ENST00000440480 POTEIP0CG38 1075 aa24.59■■□□□ 1.53
CDKN1C-204ENST00000440480 POTEJP0CG39 1038 aa24.59■■□□□ 1.53
CDKN1C-204ENST00000440480 MYSM1Q5VVJ2 828 aa24.59■■□□□ 1.53
CDKN1C-204ENST00000440480 KRT40Q6A162 431 aa24.59■■□□□ 1.53
CDKN1C-204ENST00000440480 STK38Q15208 465 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 PFKFB3Q16875 520 aaPredicted RBP24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 RBM43Q6ZSC3 357 aaKnown RBP24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 CCAR1Q8IX12 1150 aaKnown RBP24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 SPICE1Q8N0Z3 855 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 FEZ1Q99689 392 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 RIOX1Q9H6W3 641 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 SSC5DA1L4H1 1573 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 BMP3P12645 472 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 SCG2P13521 617 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 MAP3K9P80192 1104 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 SLC35G1Q2M3R5 365 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 ADALQ6DHV7 355 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 TTBK2Q6IQ55 1244 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 RRP36Q96EU6 259 aaKnown RBP24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 VCPKMTQ9H867 229 aa24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 RTN4Q9NQC3 1192 aaKnown RBP24.58■■□□□ 1.53
CDKN1C-204ENST00000440480 ESPNB1AK53 854 aa24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 NR1I2O75469 434 aa24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 PTPRAP18433 802 aa24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 SAFBQ15424 915 aaKnown RBP eCLIP24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 ZYXQ15942 572 aaKnown RBP24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 MAP1SQ66K74 1059 aaPredicted RBP24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 AS3MTQ9HBK9 375 aa24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 SEC63Q9UGP8 760 aaKnown RBP24.57■■□□□ 1.52
CDKN1C-204ENST00000440480 A0A1W2PQ27 194 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 A0A1W2PQ64 194 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 A0A1W2PQD8 194 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 CAVIN2O95810 425 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 IREB2P48200 963 aaKnown RBP24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 CAMK4Q16566 473 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 SASS6Q6UVJ0 657 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 LINC00301Q8NCQ3 95 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 NUP88Q99567 741 aaPredicted RBP24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 ZHX2Q9Y6X8 837 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 SLC16A2P36021 539 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 HOMER1Q86YM7 354 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 ADGRF4Q8IZF3 695 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 VPS54Q9P1Q0 977 aa24.56■■□□□ 1.52
CDKN1C-204ENST00000440480 POLR2AP24928 1970 aaKnown RBP24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 USP17L10C9JJH3 530 aa24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 KINO60870 393 aaKnown RBP24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 FAM160A1Q05DH4 1040 aa24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 TTLL12Q14166 644 aaPredicted RBP24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 NOL9Q5SY16 702 aaKnown RBP24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 WDR18Q9BV38 432 aa24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 KIAA1683Q9H0B3 1180 aa24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 NMRK2Q9NPI5 230 aa24.55■■□□□ 1.52
CDKN1C-204ENST00000440480 TMEM232C9JQI7 657 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 SPTLC2O15270 562 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 SPP2Q13103 211 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 IKQ13123 557 aaPredicted RBP24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 KIAA1755Q5JYT7 1200 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 ANO1Q5XXA6 986 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 LDHDQ86WU2 507 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 JMYQ8N9B5 988 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 ZNF280CQ8ND82 737 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 PIGSQ96S52 555 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 KCNJ14Q9UNX9 436 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 CSADQ9Y600 493 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 MMP1P03956 469 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 TYRO3Q06418 890 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 MRPS27Q92552 414 aaKnown RBP24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 FTOQ9C0B1 505 aaKnown RBP eCLIP24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 JMJD4Q9H9V9 463 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 CCDC39Q9UFE4 941 aa24.54■■□□□ 1.52
CDKN1C-204ENST00000440480 U2AF2P26368 475 aaKnown RBP eCLIP24.53■■□□□ 1.52
CDKN1C-204ENST00000440480 VGLL4Q14135 290 aa24.53■■□□□ 1.52
CDKN1C-204ENST00000440480 PCDHA7Q9UN72 937 aa24.53■■□□□ 1.52
CDKN1C-204ENST00000440480 USP14P54578 494 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms