RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 TMEM94Q12767 1356 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 ADCY1Q08828 1119 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 MTF1Q14872 753 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 NONOQ15233 471 aaKnown RBP eCLIP22.77■■□□□ 1.24
FMR1-208ENST00000440235 ASIC2Q16515 512 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 PEX26Q7Z412 305 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 DDX39AO00148 427 aaKnown RBP22.77■■□□□ 1.23
FMR1-208ENST00000440235 WHAMMP3Q1A5X7 153 aa22.77■■□□□ 1.23
FMR1-208ENST00000440235 TMEM87AQ8NBN3 555 aa22.77■■□□□ 1.23
FMR1-208ENST00000440235 TSGA10Q9BZW7 698 aa22.77■■□□□ 1.23
FMR1-208ENST00000440235 MTRF1LQ9UGC7 380 aaKnown RBP22.77■■□□□ 1.23
FMR1-208ENST00000440235 IFNAR2P48551 515 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 CACNB1Q02641 598 aaPredicted RBP22.76■■□□□ 1.23
FMR1-208ENST00000440235 PSMD1Q99460 953 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 ADGRL3Q9HAR2 1447 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 ACTN2P35609 894 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 PAK2Q13177 524 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 MYO1AQ9UBC5 1043 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 C2orf54Q08AI8 447 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 CAPN12Q6ZSI9 719 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 DPF2Q92785 391 aa22.76■■□□□ 1.23
FMR1-208ENST00000440235 TNFAIP3P21580 790 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 CTNNA1P35221 906 aaKnown RBP22.75■■□□□ 1.23
FMR1-208ENST00000440235 E2F5Q15329 346 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 NBPF14Q5TI25 921 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 CCDC26Q8TAB7 109 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 IQCGQ9H095 443 aaKnown RBP22.75■■□□□ 1.23
FMR1-208ENST00000440235 USH1GQ495M9 461 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 VSTM4Q8IW00 320 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 GOLGA5Q8TBA6 731 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 SYNCQ9H7C4 482 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 CTTNBP2NLQ9P2B4 639 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 IGKV5-2P06315 115 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 CCDC172P0C7W6 258 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 KCNQ4P56696 695 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 POLR2FP61218 127 aaKnown RBP22.75■■□□□ 1.23
FMR1-208ENST00000440235 CCDC77Q9BR77 488 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 PLVAPQ9BX97 442 aa22.75■■□□□ 1.23
FMR1-208ENST00000440235 IFT88Q13099 833 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 CLEC17AQ6ZS10 378 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 HAUS4Q9H6D7 363 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 MKRN1Q9UHC7 482 aaKnown RBP22.74■■□□□ 1.23
FMR1-208ENST00000440235 SMCO2A6NFE2 343 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 RPN1P04843 607 aaKnown RBP22.74■■□□□ 1.23
FMR1-208ENST00000440235 ASIC3Q9UHC3 531 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 NEBLO76041 1014 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 TCP10Q12799 353 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 TPTE2Q6XPS3 522 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 CASP8Q14790 479 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 CCDC63Q8NA47 563 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 TUBGCP2Q9BSJ2 902 aa22.74■■□□□ 1.23
FMR1-208ENST00000440235 MAP2K2P36507 400 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 LSM14BQ9BX40 385 aaKnown RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 ZC3H12CQ9C0D7 883 aaKnown RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 GSTO1P78417 241 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 TBC1D10BQ4KMP7 808 aaPredicted RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 SFMBT2Q5VUG0 894 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 CCDC170Q8IYT3 715 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 TAB3Q8N5C8 712 aaPredicted RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 SEC31BQ9NQW1 1179 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 TEX33O43247 280 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 RPSAP08865 295 aaKnown RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 DYNLL1P63167 89 aaKnown RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 CALCRLQ16602 461 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 U2AF1L4Q8WU68 220 aaKnown RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 TBC1D31Q96DN5 1066 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 ASAP1Q9ULH1 1129 aa22.73■■□□□ 1.23
FMR1-208ENST00000440235 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.73■■□□□ 1.23
FMR1-208ENST00000440235 KRT5P13647 590 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 CDC25BP30305 580 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 KRT12Q99456 494 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 PLA2G4DQ86XP0 818 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 SMCR8Q8TEV9 937 aaPredicted RBP22.72■■□□□ 1.23
FMR1-208ENST00000440235 WDR24Q96S15 920 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 GDAQ9Y2T3 454 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 FRMPD2Q68DX3 1309 aaPredicted RBP22.72■■□□□ 1.23
FMR1-208ENST00000440235 CCDC151A5D8V7 595 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 CLTAP09496 248 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 BLIDQ8IZY5 108 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 PNMA1Q8ND90 353 aa22.72■■□□□ 1.23
FMR1-208ENST00000440235 MYO1CO00159 1063 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 NUP58Q9BVL2 599 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 ARMCX5Q6P1M9 558 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 CCDC84Q86UT8 332 aaPredicted RBP22.71■■□□□ 1.23
FMR1-208ENST00000440235 MICAL1Q8TDZ2 1067 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 ZSCAN10Q96SZ4 725 aaPredicted RBP22.71■■□□□ 1.23
FMR1-208ENST00000440235 DENND2AQ9ULE3 1009 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 UTP11Q9Y3A2 253 aaKnown RBP22.71■■□□□ 1.23
FMR1-208ENST00000440235 IKBKBO14920 756 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 FTCDO95954 541 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 DNM2P50570 870 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 MRPL12P52815 198 aaKnown RBP22.71■■□□□ 1.23
FMR1-208ENST00000440235 TUBB2AQ13885 445 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 VSIG1Q86XK7 387 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 REXO1Q8N1G1 1221 aaKnown RBP22.71■■□□□ 1.23
FMR1-208ENST00000440235 TUBB2BQ9BVA1 445 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 USTQ9Y2C2 406 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 CCDC105Q8IYK2 499 aa22.71■■□□□ 1.23
FMR1-208ENST00000440235 PCK1P35558 622 aa22.7■■□□□ 1.22
FMR1-208ENST00000440235 PEX19P40855 299 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms