RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CPXCR1Q8N123 301 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 CHMP4CQ96CF2 233 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 OSBPL3Q9H4L5 887 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 ANAPC4Q9UJX5 808 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 ZNF214Q9UL59 606 aaPredicted RBP23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 LAMA4Q16363 1823 aa23.49■■□□□ 1.35
SHROOM1-204ENST00000440118 HIP1O00291 1037 aa23.49■■□□□ 1.35
SHROOM1-204ENST00000440118 SLC1A4P43007 532 aa23.49■■□□□ 1.35
SHROOM1-204ENST00000440118 INCENPQ9NQS7 918 aa23.49■■□□□ 1.35
SHROOM1-204ENST00000440118 DDX20Q9UHI6 824 aaKnown RBP23.49■■□□□ 1.35
SHROOM1-204ENST00000440118 MTMR7Q9Y216 660 aa23.49■■□□□ 1.35
SHROOM1-204ENST00000440118 COBLO75128 1261 aa23.48■■□□□ 1.35
SHROOM1-204ENST00000440118 FGAP02671 866 aa23.48■■□□□ 1.35
SHROOM1-204ENST00000440118 STAT2P52630 851 aa23.48■■□□□ 1.35
SHROOM1-204ENST00000440118 HAND2P61296 217 aa23.48■■□□□ 1.35
SHROOM1-204ENST00000440118 CWC27Q6UX04 472 aaKnown RBP23.48■■□□□ 1.35
SHROOM1-204ENST00000440118 ZMYM6O95789 1325 aa23.48■■□□□ 1.35
SHROOM1-204ENST00000440118 TMEM232C9JQI7 657 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 ORC4O43929 436 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 NMT2O60551 498 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 PGK2P07205 417 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 HABP4Q5JVS0 413 aaKnown RBP23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 CHRDL2Q6WN34 429 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 C7orf61Q8IZ16 206 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 REPS2Q8NFH8 660 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 MAML3Q96JK9 1138 aa23.47■■□□□ 1.35
SHROOM1-204ENST00000440118 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 CYBAP13498 195 aa23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 CCDC96Q2M329 555 aa23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 DDX11Q96FC9 970 aa23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 TRIOBPQ9H2D6 2365 aa23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 RAVER2Q9HCJ3 691 aaKnown RBP23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 COLQQ9Y215 455 aaPredicted RBP23.46■■□□□ 1.35
SHROOM1-204ENST00000440118 MCCP23508 829 aa23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 LHX8Q68G74 356 aa23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 MFSD6Q6ZSS7 791 aa23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 FAM160B2Q86V87 743 aa23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 CHURC1Q8WUH1 139 aa23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 GMCL1Q96IK5 515 aa23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 RNF41Q9H4P4 317 aaPredicted RBP23.45■■□□□ 1.34
SHROOM1-204ENST00000440118 TRPV1Q8NER1 839 aa23.44■■□□□ 1.34
SHROOM1-204ENST00000440118 SLC38A10Q9HBR0 1119 aa23.44■■□□□ 1.34
SHROOM1-204ENST00000440118 FDX1P10109 184 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 OAZ1P54368 228 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 ANO1Q5XXA6 986 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 KCTD1Q719H9 257 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 IL17RBQ9NRM6 502 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 HOMER2Q9NSB8 354 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 FBXO40Q9UH90 709 aa23.43■■□□□ 1.34
SHROOM1-204ENST00000440118 ZNF213O14771 459 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 ATP2A1O14983 1001 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 SEPT4O43236 478 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 PCP11498 1178 aaKnown RBP23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 MNX1P50219 401 aaPredicted RBP23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 AKNAD1Q5T1N1 836 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 ANKRD35Q8N283 1001 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 STAG1Q8WVM7 1258 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 CNPY2Q9Y2B0 182 aa23.42■■□□□ 1.34
SHROOM1-204ENST00000440118 PFASO15067 1338 aa23.41■■□□□ 1.34
SHROOM1-204ENST00000440118 PRAMEF19Q5SWL8 479 aa23.41■■□□□ 1.34
SHROOM1-204ENST00000440118 TINF2Q9BSI4 451 aa23.41■■□□□ 1.34
SHROOM1-204ENST00000440118 DIS3Q9Y2L1 958 aaKnown RBP23.41■■□□□ 1.34
SHROOM1-204ENST00000440118 RIPK3Q9Y572 518 aa23.41■■□□□ 1.34
SHROOM1-204ENST00000440118 TACC3Q9Y6A5 838 aa23.41■■□□□ 1.34
SHROOM1-204ENST00000440118 MCM3APO60318 1980 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 KBTBD13C9JR72 458 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 FGRP09769 529 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 TOP1P11387 765 aaKnown RBP23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 ZNF792Q3KQV3 632 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 RCSD1Q6JBY9 416 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 TBC1D10CQ8IV04 446 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 ARRDC4Q8NCT1 418 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 CHST13Q8NET6 341 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 DCAF4Q8WV16 495 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 ESR2Q92731 530 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 SENP6Q9GZR1 1112 aaPredicted RBP23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 SMCHD1A6NHR9 2005 aa23.4■■□□□ 1.34
SHROOM1-204ENST00000440118 DNM1LO00429 736 aa23.39■■□□□ 1.33
SHROOM1-204ENST00000440118 TTC22Q5TAA0 569 aa23.39■■□□□ 1.33
SHROOM1-204ENST00000440118 CCDC174Q6PII3 467 aa23.39■■□□□ 1.33
SHROOM1-204ENST00000440118 RASGRP2Q7LDG7 609 aa23.39■■□□□ 1.33
SHROOM1-204ENST00000440118 NRBP1Q9UHY1 535 aa23.39■■□□□ 1.33
SHROOM1-204ENST00000440118 ZMYND8Q9ULU4 1186 aaPredicted RBP23.39■■□□□ 1.33
SHROOM1-204ENST00000440118 IGHA2P01877 340 aa23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 PDE4AP27815 886 aa23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 IMMTQ16891 758 aaKnown RBP23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 GJC2Q5T442 439 aaPredicted RBP23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 ACAD9Q9H845 621 aa23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 RNF146Q9NTX7 359 aa23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 CTNNA3Q9UI47 895 aa23.38■■□□□ 1.33
SHROOM1-204ENST00000440118 NEDD4P46934 1319 aa23.37■■□□□ 1.33
SHROOM1-204ENST00000440118 RARBP10826 455 aa23.37■■□□□ 1.33
SHROOM1-204ENST00000440118 COL6A1P12109 1028 aa23.37■■□□□ 1.33
SHROOM1-204ENST00000440118 TMEM47Q9BQJ4 181 aa23.37■■□□□ 1.33
SHROOM1-204ENST00000440118 TCP11L1Q9NUJ3 509 aa23.37■■□□□ 1.33
SHROOM1-204ENST00000440118 PRR12Q9ULL5 1215 aa23.37■■□□□ 1.33
SHROOM1-204ENST00000440118 FRMPD2Q68DX3 1309 aaPredicted RBP23.36■■□□□ 1.33
SHROOM1-204ENST00000440118 PLA2G6O60733 806 aa23.36■■□□□ 1.33
SHROOM1-204ENST00000440118 ALAS1P13196 640 aa23.36■■□□□ 1.33
SHROOM1-204ENST00000440118 SYN1P17600 705 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms