RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	COPB2	P35606	906 aa		19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	ACLY	P53396	1101 aa		19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	IRX5	P78411	483 aa	Predicted RBP	19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	FPGS	Q05932	587 aa		19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	MAMDC4	Q6UXC1	1216 aa		19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	TMEM39A	Q9NV64	488 aa		19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	SLC4A4	Q9Y6R1	1079 aa		19.51	■□□□□ 0.71
LAMB1-205	ENST00000439976	ADCY6	O43306	1168 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	GRIN2C	Q14957	1233 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	MSL3	Q8N5Y2	521 aa	Known RBP	19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	FGD4	Q96M96	766 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	SLF1	Q9BQI6	1058 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	TEX13B	Q9BXU2	312 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	STARD7	Q9NQZ5	370 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	TBX21	Q9UL17	535 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	CNPY2	Q9Y2B0	182 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	MCM3AP	O60318	1980 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	SYNGAP1	Q96PV0	1343 aa		19.5	■□□□□ 0.71
LAMB1-205	ENST00000439976	HMMR	O75330	724 aa		19.49	■□□□□ 0.71
LAMB1-205	ENST00000439976	RASA1	P20936	1047 aa		19.49	■□□□□ 0.71
LAMB1-205	ENST00000439976	KCNA10	Q16322	511 aa		19.49	■□□□□ 0.71
LAMB1-205	ENST00000439976	AMOTL1	Q8IY63	956 aa		19.49	■□□□□ 0.71
LAMB1-205	ENST00000439976	USP38	Q8NB14	1042 aa		19.49	■□□□□ 0.71
LAMB1-205	ENST00000439976	ATP2A1	O14983	1001 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	RAD21	O60216	631 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	NDUFB10	O96000	172 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	DNAJB2	P25686	324 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	SBK1	Q52WX2	424 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	SNRNP48	Q6IEG0	339 aa	Known RBP	19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	C16orf59	Q7L2K0	433 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	DDRGK1	Q96HY6	314 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	STRBP	Q96SI9	672 aa	Known RBP	19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	NYAP2	Q9P242	653 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	ARPP21	Q9UBL0	812 aa	Predicted RBP	19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	FAM184B	Q9ULE4	1060 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	COG6	Q9Y2V7	657 aa		19.48	■□□□□ 0.71
LAMB1-205	ENST00000439976	IGKV6D-41	A0A0C4DH26	115 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	MOXD2P	A6NHM9	499 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976		F5H6K3	240 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	DUSP11	O75319	330 aa	Known RBP	19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	TIMP1	P01033	207 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	CST5	P28325	142 aa	Predicted RBP	19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	CDK7	P50613	346 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	KLRC3	Q07444	240 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	ZNF467	Q7Z7K2	595 aa	Predicted RBP	19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	NUP133	Q8WUM0	1156 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	19.47	■□□□□ 0.71	4e-13	■■□□□ 14.3
LAMB1-205	ENST00000439976	DDX19B	Q9UMR2	479 aa		19.47	■□□□□ 0.71
LAMB1-205	ENST00000439976	GSG1L2	A8MUP6	293 aa		19.46	■□□□□ 0.71
LAMB1-205	ENST00000439976	DCDC2C	A8MYV0	355 aa		19.46	■□□□□ 0.71
LAMB1-205	ENST00000439976	RASIP1	Q5U651	963 aa		19.46	■□□□□ 0.71
LAMB1-205	ENST00000439976	ZHX1	Q9UKY1	873 aa	Predicted RBP	19.46	■□□□□ 0.71
LAMB1-205	ENST00000439976	MYH4	Q9Y623	1939 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	CHD9	Q3L8U1	2897 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	CTAGE5	O15320	804 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	ACVR2B	Q13705	512 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	MFSD5	Q6N075	450 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	STK11IP	Q8N1F8	1099 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	PRPF38A	Q8NAV1	312 aa	Known RBP	19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	DDX11	Q96FC9	970 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	KATNBL1	Q9H079	304 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	UPF3A	Q9H1J1	476 aa	Known RBP	19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	PRDM6	Q9NQX0	595 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	ELP1	O95163	1332 aa		19.45	■□□□□ 0.7
LAMB1-205	ENST00000439976	MYO9B	Q13459	2157 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	MS4A1	P11836	297 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	TMEM240	Q5SV17	173 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	ZSCAN25	Q6NSZ9	544 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	CPXCR1	Q8N123	301 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	ZNF576	Q9H609	170 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	SLC38A10	Q9HBR0	1119 aa		19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	19.44	■□□□□ 0.7
LAMB1-205	ENST00000439976	GRXCR1	A8MXD5	290 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	ASGR1	P07306	291 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	PBX2	P40425	430 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	GJA9	P57773	515 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	NKX3-2	P78367	333 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	CCDC144B	Q3MJ40	725 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	GIMAP6	Q6P9H5	292 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	OSBP2	Q969R2	916 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	MKL1	Q969V6	931 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	TIFA	Q96CG3	184 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	GLT1D1	Q96MS3	346 aa		19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	RAVER2	Q9HCJ3	691 aa	Known RBP	19.43	■□□□□ 0.7
LAMB1-205	ENST00000439976	SMARCA5	O60264	1052 aa	Predicted RBP	19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	C6orf222	P0C671	652 aa	Predicted RBP	19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	ARMCX2	Q7L311	632 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	FAM126B	Q8IXS8	530 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	KIFC2	Q96AC6	838 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	PBX4	Q9BYU1	374 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	ABHD16B	Q9H3Z7	469 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	MKNK2	Q9HBH9	465 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	CLIP2	Q9UDT6	1046 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	CHD7	Q9P2D1	2997 aa		19.42	■□□□□ 0.7
LAMB1-205	ENST00000439976	MROH7	Q68CQ1	1323 aa		19.42	■□□□□ 0.7

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