RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
SNRPD3-204ENST00000439775 GMCL1Q96IK5 515 aa19.31■□□□□ 0.68
SNRPD3-204ENST00000439775 FAM227BQ96M60 508 aa19.31■□□□□ 0.68
SNRPD3-204ENST00000439775 OSBPL3Q9H4L5 887 aa19.31■□□□□ 0.68
SNRPD3-204ENST00000439775 TSPY2A6NKD2 308 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 ORC4O43929 436 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 PGK2P07205 417 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 FDX1P10109 184 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 BMP3P12645 472 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 OAZ1P54368 228 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 NUCB1Q02818 461 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 CTDSPL2Q05D32 466 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 LRRC26Q2I0M4 334 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 SLFN13Q68D06 897 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 KIFC2Q96AC6 838 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 GDF15Q99988 308 aa19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 ZMYND8Q9ULU4 1186 aaPredicted RBP19.3■□□□□ 0.68
SNRPD3-204ENST00000439775 LAMA3Q16787 3333 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 IGHDP01880 384 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 FGRP09769 529 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 BMP8BP34820 402 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 STAT2P52630 851 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 MSL3Q8N5Y2 521 aaKnown RBP19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 ARRDC4Q8NCT1 418 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 TINF2Q9BSI4 451 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 RIPK3Q9Y572 518 aa19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 CTDP1Q9Y5B0 961 aaPredicted RBP19.29■□□□□ 0.68
SNRPD3-204ENST00000439775 DNAH12Q6ZR08 3092 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 TRIM6-TRIM34B2RNG4 842 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 HSPD1P10809 573 aaKnown RBP19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 NOVP48745 357 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 NMIQ13287 307 aaPredicted RBP19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 ZNF589Q86UQ0 364 aaPredicted RBP19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 FAM160B2Q86V87 743 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 CPXCR1Q8N123 301 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 SENP6Q9GZR1 1112 aaPredicted RBP19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 TACC3Q9Y6A5 838 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 SZT2Q5T011 3432 aa19.28■□□□□ 0.68
SNRPD3-204ENST00000439775 CCDC171Q6TFL3 1326 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 DNAJC25-GNG10A0A024R161 153 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 RANBP6O60518 1105 aaKnown RBP19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 PLA2G6O60733 806 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 FGAP02671 866 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 SYN1P17600 705 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 SLC1A4P43007 532 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 PRAMEF19Q5SWL8 479 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 PLEKHM2Q8IWE5 1019 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 CHST13Q8NET6 341 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 CHURC1Q8WUH1 139 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 RAVER2Q9HCJ3 691 aaKnown RBP19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 INCENPQ9NQS7 918 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 FBXO40Q9UH90 709 aa19.27■□□□□ 0.68
SNRPD3-204ENST00000439775 SYNGAP1Q96PV0 1343 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 PLXNA1Q9UIW2 1896 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 ZNFX1Q9P2E3 1918 aaKnown RBP19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 TMEM232C9JQI7 657 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 KBTBD13C9JR72 458 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 NMT2O60551 498 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 GJC2Q5T442 439 aaPredicted RBP19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 ANO1Q5XXA6 986 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 ZNF467Q7Z7K2 595 aaPredicted RBP19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 STAG1Q8WVM7 1258 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 RILPL2Q969X0 211 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
SNRPD3-204ENST00000439775 PCP11498 1178 aaKnown RBP19.25■□□□□ 0.67
SNRPD3-204ENST00000439775 MCCP23508 829 aa19.25■□□□□ 0.67
SNRPD3-204ENST00000439775 MAGEA10P43363 369 aaPredicted RBP19.25■□□□□ 0.67
SNRPD3-204ENST00000439775 MAMDC4Q6UXC1 1216 aa19.25■□□□□ 0.67
SNRPD3-204ENST00000439775 CNPY2Q9Y2B0 182 aa19.25■□□□□ 0.67
SNRPD3-204ENST00000439775 ZNF865P0CJ78 1059 aaPredicted RBP19.24■□□□□ 0.67
SNRPD3-204ENST00000439775 RARBP10826 455 aa19.24■□□□□ 0.67
SNRPD3-204ENST00000439775 AKR1A1P14550 325 aa19.24■□□□□ 0.67
SNRPD3-204ENST00000439775 SDSP20132 328 aa19.24■□□□□ 0.67
SNRPD3-204ENST00000439775 LRRC41Q15345 812 aa19.24■□□□□ 0.67
SNRPD3-204ENST00000439775 ISY1Q9ULR0 285 aaKnown RBP19.24■□□□□ 0.67
SNRPD3-204ENST00000439775 TAL1P17542 331 aaPredicted RBP19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 RCSD1Q6JBY9 416 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 ANKRD35Q8N283 1001 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 ACAD9Q9H845 621 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 XPNPEP3Q9NQH7 507 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 TOMM22Q9NS69 142 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 TCP11L1Q9NUJ3 509 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 ZNF536O15090 1300 aa19.23■□□□□ 0.67
SNRPD3-204ENST00000439775 SLC4A3P48751 1232 aa19.22■□□□□ 0.67
SNRPD3-204ENST00000439775 ATN1P54259 1190 aaPredicted RBP19.22■□□□□ 0.67
SNRPD3-204ENST00000439775 RTP1P59025 263 aa19.22■□□□□ 0.67
SNRPD3-204ENST00000439775 SNX17Q15036 470 aa19.22■□□□□ 0.67
SNRPD3-204ENST00000439775 TKFCQ3LXA3 575 aa19.22■□□□□ 0.67
SNRPD3-204ENST00000439775 KCTD1Q719H9 257 aa19.22■□□□□ 0.67
SNRPD3-204ENST00000439775 HIP1O00291 1037 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 TOP1P11387 765 aaKnown RBP19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 HAND2P61296 217 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms