RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 PCNTO95613 3336 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 RNF40O75150 1001 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 CXCL9Q07325 125 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 MORC3Q14149 939 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 DOK7Q18PE1 504 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 SPECC1Q5M775 1068 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 IGSF22Q8N9C0 903 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 NCOA7Q8NI08 942 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 AFAP1L1Q8TED9 768 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 CDK5RAP2Q96SN8 1893 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 MROH5Q6ZUA9 1318 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 IFIT1P09914 478 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 NT5DC1Q5TFE4 455 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 RALYLQ86SE5 291 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 NOA1Q8NC60 698 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 MYCBPQ99417 103 aaPredicted RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 ZNRF3Q9ULT6 936 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 MAST2Q6P0Q8 1798 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 TRPM7Q96QT4 1865 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 LOC102724159A0A0B4J2E5 919 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 FOXP2O15409 715 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 SARSP49591 514 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 PWP2Q15269 919 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 DNAJC21Q5F1R6 531 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 ZNF526Q8TF50 670 aaPredicted RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 ANKRD2Q9GZV1 360 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 TTF2Q9UNY4 1162 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 ZMYM6O95789 1325 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 SHTN1A0MZ66 631 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 C6orf229H3BNL8 230 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 FGAP02671 866 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 WDR93Q6P2C0 686 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 SUGP1Q8IWZ8 645 aaKnown RBP9.66□□□□□ -0.86
HPS4-206ENST00000439453 VIPAS39Q9H9C1 493 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 SERTAD1Q9UHV2 236 aa9.66□□□□□ -0.86
HPS4-206ENST00000439453 A0A087WUV0 522 aaPredicted RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 PDE8BO95263 885 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 SYF2O95926 243 aaKnown RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 AARSP49588 968 aaKnown RBP eCLIP9.65□□□□□ -0.86
HPS4-206ENST00000439453 PLCD1P51178 756 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 CTCFLQ8NI51 663 aaPredicted RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 GPR108Q9NPR9 543 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 MFAP3LO75121 409 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 CDKL5O76039 1030 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 PRPF6O94906 941 aaKnown RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 MMS22LQ6ZRQ5 1243 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 APTXQ7Z2E3 356 aaKnown RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 NIM1KQ8IY84 436 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 GPC2Q8N158 579 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 TRIML1Q8N9V2 468 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 ACRBPQ8NEB7 543 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 CNNM1Q9NRU3 951 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 PSMD14O00487 310 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 POLR2DO15514 142 aaKnown RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 ERCC5P28715 1186 aaPredicted RBP9.65□□□□□ -0.86
HPS4-206ENST00000439453 PBX1P40424 430 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 METAP2P50579 478 aaKnown RBP eCLIP9.65□□□□□ -0.86
HPS4-206ENST00000439453 TRDNQ13061 729 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 GRAMD1CQ8IYS0 662 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 GMLQ99445 158 aa9.65□□□□□ -0.86
HPS4-206ENST00000439453 WDR19Q8NEZ3 1342 aa9.65□□□□□ -0.87
HPS4-206ENST00000439453 ABL1P00519 1130 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 IL1R1P14778 569 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 SART3Q15020 963 aaKnown RBP9.64□□□□□ -0.87
HPS4-206ENST00000439453 STK11IPQ8N1F8 1099 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 PHKBQ93100 1093 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 EYA3Q99504 573 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 MYO6Q9UM54 1294 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 PAPPA2Q9BXP8 1791 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 RXRAP19793 462 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 TRIM29Q14134 588 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 UBE4AQ14139 1066 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 MICALL1Q8N3F8 863 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 CCDC148Q8NFR7 591 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 FAM84BQ96KN1 310 aaPredicted RBP9.64□□□□□ -0.87
HPS4-206ENST00000439453 RRAGCQ9HB90 399 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 FOCADQ5VW36 1801 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 RAD17O75943 681 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 APPP05067 770 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
HPS4-206ENST00000439453 POTEIP0CG38 1075 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 CASP14P31944 242 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 GRIN1Q05586 938 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 MCTP2Q6DN12 878 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 NCAPH2Q6IBW4 605 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
HPS4-206ENST00000439453 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 TEX2Q8IWB9 1127 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 FAM107BQ9H098 131 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 MYO1AQ9UBC5 1043 aa9.64□□□□□ -0.87
HPS4-206ENST00000439453 ADD3Q9UEY8 706 aaKnown RBP9.64□□□□□ -0.87
HPS4-206ENST00000439453 ZNF213O14771 459 aa9.63□□□□□ -0.87
HPS4-206ENST00000439453 FECHP22830 423 aa9.63□□□□□ -0.87
HPS4-206ENST00000439453 ARHGAP25P42331 645 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms