RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 CATIPQ7Z7H3 387 aa19.77■□□□□ 0.76
TARDBP-203ENST00000439080 ZNF654Q8IZM8 581 aa19.77■□□□□ 0.76
TARDBP-203ENST00000439080 REPS2Q8NFH8 660 aa19.77■□□□□ 0.76
TARDBP-203ENST00000439080 CHURC1Q8WUH1 139 aa19.77■□□□□ 0.76
TARDBP-203ENST00000439080 CCDC69A6NI79 296 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 PARP1P09874 1014 aaKnown RBP19.76■□□□□ 0.75
TARDBP-203ENST00000439080 SLC16A2P36021 539 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 PSMC4P43686 418 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 FCGRTP55899 365 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 ANAPC15P60006 121 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 TMEM132BQ14DG7 1078 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 Q3C1V9 767 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 TRIM47Q96LD4 638 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 SPATC1LQ9H0A9 340 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 SLC38A10Q9HBR0 1119 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 PRR12Q9ULL5 1215 aa19.76■□□□□ 0.75
TARDBP-203ENST00000439080 DDAH1O94760 285 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 CCNA1P78396 465 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 TROAPQ12815 778 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 PLS1Q14651 629 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 GRM4Q14833 912 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 SYDE2Q5VT97 1194 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 BTNL9Q6UXG8 535 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 OTOP1Q7RTM1 612 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 CTU1Q7Z7A3 348 aaKnown RBP19.75■□□□□ 0.75
TARDBP-203ENST00000439080 SGMS1Q86VZ5 419 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 MYL10Q9BUA6 226 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 TM6SF1Q9BZW5 370 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 PORCNQ9H237 461 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 EFCC1Q9HA90 598 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 ZSWIM6Q9HCJ5 1215 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 ZNF214Q9UL59 606 aaPredicted RBP19.75■□□□□ 0.75
TARDBP-203ENST00000439080 TRIM17Q9Y577 477 aa19.75■□□□□ 0.75
TARDBP-203ENST00000439080 PLXNA1Q9UIW2 1896 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 TNPO2O14787 897 aaKnown RBP19.74■□□□□ 0.75
TARDBP-203ENST00000439080 FMNL1O95466 1100 aaPredicted RBP19.74■□□□□ 0.75
TARDBP-203ENST00000439080 FGD1P98174 961 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 Q6ZUG5 572 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 RUFY3Q7L099 469 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 TMTC2Q8N394 836 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 NUP133Q8WUM0 1156 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 MOV10L1Q9BXT6 1211 aaKnown RBP19.74■□□□□ 0.75
TARDBP-203ENST00000439080 UPF3BQ9BZI7 483 aaKnown RBP19.74■□□□□ 0.75
TARDBP-203ENST00000439080 CPVLQ9H3G5 476 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 MAD2L2Q9UI95 211 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 CTDP1Q9Y5B0 961 aaPredicted RBP19.74■□□□□ 0.75
TARDBP-203ENST00000439080 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
TARDBP-203ENST00000439080 SMCHD1A6NHR9 2005 aa19.73■□□□□ 0.75
TARDBP-203ENST00000439080 ZNFX1Q9P2E3 1918 aaKnown RBP19.73■□□□□ 0.75
TARDBP-203ENST00000439080 ZBED4O75132 1171 aa19.73■□□□□ 0.75
TARDBP-203ENST00000439080 ARHGEF6Q15052 776 aa19.73■□□□□ 0.75
TARDBP-203ENST00000439080 CCAR1Q8IX12 1150 aaKnown RBP19.73■□□□□ 0.75
TARDBP-203ENST00000439080 STAG2Q8N3U4 1231 aa19.73■□□□□ 0.75
TARDBP-203ENST00000439080 SLC12A7Q9Y666 1083 aa19.73■□□□□ 0.75
TARDBP-203ENST00000439080 FDX1P10109 184 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 RXRAP19793 462 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 MAPK4P31152 587 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 SNAP25P60880 206 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 COL13A1Q5TAT6 717 aaPredicted RBP19.72■□□□□ 0.75
TARDBP-203ENST00000439080 WDR78Q5VTH9 848 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 SNRNP48Q6IEG0 339 aaKnown RBP19.72■□□□□ 0.75
TARDBP-203ENST00000439080 MICU3Q86XE3 530 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 RAB11FIP4Q86YS3 637 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 IL17RAQ96F46 866 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 TEX13BQ9BXU2 312 aa19.72■□□□□ 0.75
TARDBP-203ENST00000439080 RANBP17Q9H2T7 1088 aaKnown RBP19.72■□□□□ 0.75
TARDBP-203ENST00000439080 PALM3A6NDB9 673 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-203ENST00000439080 GNRH1P01148 92 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 OAZ1P54368 228 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 CCDC174Q6PII3 467 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 APOA5Q6Q788 366 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 RIOX2Q8IUF8 465 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 CPXCR1Q8N123 301 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 SHCBP1Q8NEM2 672 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 CTCFLQ8NI51 663 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-203ENST00000439080 BRF1Q92994 677 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 MAP3K14Q99558 947 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 UBA5Q9GZZ9 404 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 CWC22Q9HCG8 908 aaKnown RBP19.71■□□□□ 0.75
TARDBP-203ENST00000439080 RAVER2Q9HCJ3 691 aaKnown RBP19.71■□□□□ 0.75
TARDBP-203ENST00000439080 ZNF536O15090 1300 aa19.71■□□□□ 0.75
TARDBP-203ENST00000439080 BAZ2BQ9UIF8 2168 aaKnown RBP19.71■□□□□ 0.75
TARDBP-203ENST00000439080 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 ATP2A1O14983 1001 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 CALM1P0DP23 149 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 CALM2P0DP24 149 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 CALM3P0DP25 149 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 ERCC3P19447 782 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 STAT3P40763 770 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 PRKCZQ05513 592 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 GPR142Q7Z601 462 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 NCAPG2Q86XI2 1143 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 CCDC144CPQ8IYA2 1237 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 FBXL16Q8N461 479 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 COA7Q96BR5 231 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 AGXT2Q9BYV1 514 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 BRPF3Q9ULD4 1205 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 KLRF2D3W0D1 207 aa19.7■□□□□ 0.74
TARDBP-203ENST00000439080 DHX16O60231 1041 aaKnown RBP19.7■□□□□ 0.74
TARDBP-203ENST00000439080 SLC25A27O95847 323 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms