RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CCAR1Q8IX12 1150 aaKnown RBP4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 ZDHHC14Q8IZN3 488 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 TMEM87BQ96K49 555 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 TGIF2Q9GZN2 237 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 OSBPL2Q9H1P3 480 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 ZNF552Q9H707 407 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 SP110Q9HB58 689 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 RTEL1Q9NZ71 1219 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 KCNH3Q9ULD8 1083 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 IRAK3Q9Y616 596 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 MRPL42Q9Y6G3 142 aaKnown RBP4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 OTOL1A6NHN0 477 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 CELA3BP08861 270 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 VMACQ2NL98 169 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 SKOR2Q2VWA4 1001 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 GAB4Q2WGN9 574 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 ADGRF1Q5T601 910 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 FILIP1Q7Z7B0 1213 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 TSPYL5Q86VY4 417 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 FEZF2Q8TBJ5 459 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 PANK1Q8TE04 598 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 FBF1Q8TES7 1133 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 CCSER2Q9H7U1 834 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 GCM1Q9NP62 436 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 GNL3LQ9NVN8 582 aaKnown RBP4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 SIRT5Q9NXA8 310 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 DDX56Q9NY93 547 aaKnown RBP4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 SPG7Q9UQ90 795 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 PCDHB5Q9Y5E4 795 aa4.75□□□□□ -1.65
HMGB1P12-201ENST00000438594 OR14I1A6ND48 311 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 GIPC1O14908 333 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 TREHO43280 583 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 PSPNO60542 156 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 TNNI2P48788 182 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 AFF3P51826 1226 aaKnown RBP4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 SRSF3P84103 164 aaKnown RBP4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 ATP2B2Q01814 1243 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 CHRNEQ04844 493 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 DUSP4Q13115 394 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 MAP3K11Q16584 847 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 EAPPQ56P03 285 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 SLC6A19Q695T7 634 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 SV2BQ7L1I2 683 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 GGNQ86UU5 652 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 MRPL41Q8IXM3 137 aaKnown RBP4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 DTWD2Q8NBA8 298 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 CXorf38Q8TB03 319 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 PNISRQ8TF01 805 aaKnown RBP4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 SIGLEC10Q96LC7 697 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 RPS6KC1Q96S38 1066 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 GPR62Q9BZJ7 368 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 ACBD3Q9H3P7 528 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 FAM8A1Q9UBU6 413 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 WWC3Q9ULE0 1092 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 CEP131Q9UPN4 1083 aa4.74□□□□□ -1.65
HMGB1P12-201ENST00000438594 CCER2I3L3R5 266 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 EXOC5O00471 708 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 LRRN2O75325 713 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 WDHD1O75717 1129 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 S100BP04271 92 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 DNAJA1P31689 397 aaKnown RBP4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 GYS2P54840 703 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 EVA1CP58658 441 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 FANCCQ00597 558 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 PDE4BQ07343 736 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 BIRC2Q13490 618 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 NR0B2Q15466 257 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 CLEC16AQ2KHT3 1053 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 ALG1LQ6GMV1 187 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 FMNL3Q8IVF7 1028 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 ANKS4BQ8N8V4 417 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 DNAJB8Q8NHS0 232 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 XYLT2Q9H1B5 865 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 C12orf49Q9H741 205 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 COMMD10Q9Y6G5 202 aa4.73□□□□□ -1.65
HMGB1P12-201ENST00000438594 PRC1O43663 620 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 BDNFP23560 247 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 SNX17Q15036 470 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 CCDC85BQ15834 202 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 SOGA3Q5TF21 947 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 TMEM87AQ8NBN3 555 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 BORCS6Q96GS4 357 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 SENP7Q9BQF6 1050 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 SPC25Q9HBM1 224 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 ZMYM5Q9UJ78 669 aa4.72□□□□□ -1.65
HMGB1P12-201ENST00000438594 CCDC189A1A4V9 331 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 GFRA2O00451 464 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 DNAJC6O75061 913 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 P4HBP07237 508 aaKnown RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 EPHB3P54753 998 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 CHMP4BP1P59074 171 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 AMPD3Q01432 767 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 MYBPC2Q14324 1141 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 SLC14A2Q15849 920 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 MCATQ8IVS2 390 aaKnown RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 ZSCAN29Q8IWY8 852 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 FAM13CQ8NE31 585 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 ANKRD24Q8TF21 1146 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms