RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 TMTC3Q6ZXV5 915 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 FAM43AQ8N2R8 423 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 MB21D1Q8N884 522 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 GTF3C6Q969F1 213 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 ASCC2Q9H1I8 757 aaPredicted RBP21.39■■□□□ 1.01
HDAC6-208ENST00000438518 RBM27Q9P2N5 1060 aaKnown RBP21.39■■□□□ 1.01
HDAC6-208ENST00000438518 PNMA2Q9UL42 364 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 IGF2BP3O00425 579 aaKnown RBP eCLIP21.38■■□□□ 1.01
HDAC6-208ENST00000438518 GOLGA8HP0CJ92 632 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 DSG3P32926 999 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 SYDE2Q5VT97 1194 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 RASGRP2Q7LDG7 609 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 HSCBQ8IWL3 235 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 STAG2Q8N3U4 1231 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 GPCPD1Q9NPB8 672 aa21.38■■□□□ 1.01
HDAC6-208ENST00000438518 CPLX1O14810 134 aa21.37■■□□□ 1.01
HDAC6-208ENST00000438518 GCLCP48506 637 aaPredicted RBP21.37■■□□□ 1.01
HDAC6-208ENST00000438518 SCRN1Q12765 414 aa21.37■■□□□ 1.01
HDAC6-208ENST00000438518 NOL8Q76FK4 1167 aaKnown RBP21.37■■□□□ 1.01
HDAC6-208ENST00000438518 CCDC144CPQ8IYA2 1237 aa21.37■■□□□ 1.01
HDAC6-208ENST00000438518 LARP6Q9BRS8 491 aaKnown RBP21.37■■□□□ 1.01
HDAC6-208ENST00000438518 RIOX1Q9H6W3 641 aa21.37■■□□□ 1.01
HDAC6-208ENST00000438518 ADAMTS5Q9UNA0 930 aa21.37■■□□□ 1.01
HDAC6-208ENST00000438518 SPDYE16A6NNV3 312 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 K7ELQ4 463 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 CD2BP2O95400 341 aaKnown RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 IFNAR1P17181 557 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 CDC27P30260 824 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 HERVK_113P62684 666 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 CCT2P78371 535 aaKnown RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 TRAF1Q13077 416 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 STK3Q13188 491 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 SMCR8Q8TEV9 937 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 TMX3Q96JJ7 454 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 CFHR5Q9BXR6 569 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 FAM217BQ9NTX9 383 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 PRR12Q9ULL5 1215 aa21.36■■□□□ 1.01
HDAC6-208ENST00000438518 COL11A1P12107 1806 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-208ENST00000438518 MYH6P13533 1939 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 ZBED4O75132 1171 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 ADD1P35611 737 aaKnown RBP21.35■■□□□ 1.01
HDAC6-208ENST00000438518 OAZ1P54368 228 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 TAF1CQ15572 869 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-208ENST00000438518 TTBK2Q6IQ55 1244 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 RAB11FIP4Q86YS3 637 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 ZIC5Q96T25 663 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 LLPHQ9BRT6 129 aaKnown RBP21.35■■□□□ 1.01
HDAC6-208ENST00000438518 RNF26Q9BY78 433 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-208ENST00000438518 RANBP17Q9H2T7 1088 aaKnown RBP21.35■■□□□ 1.01
HDAC6-208ENST00000438518 ZFYVE28Q9HCC9 887 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 FBXO28Q9NVF7 368 aa21.35■■□□□ 1.01
HDAC6-208ENST00000438518 CA12O43570 354 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 PLEKHA8P1O95397 391 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 LARGE1O95461 756 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 MAP2K1Q02750 393 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-208ENST00000438518 NTRK3Q16288 839 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 TRIM22Q8IYM9 498 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 ADGRF4Q8IZF3 695 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 SRBD1Q8N5C6 995 aaKnown RBP21.34■■□□□ 1.01
HDAC6-208ENST00000438518 MTMR8Q96EF0 704 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 SLC38A10Q9HBR0 1119 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 SAGE1Q9NXZ1 904 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
HDAC6-208ENST00000438518 CTDP1Q9Y5B0 961 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-208ENST00000438518 CNTNAP5Q8WYK1 1306 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 STK36Q9NRP7 1315 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 VWA5AO00534 786 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 ATP2A1O14983 1001 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 SLC16A2P36021 539 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 BECN1Q14457 450 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 RRP36Q96EU6 259 aaKnown RBP21.33■■□□□ 1.01
HDAC6-208ENST00000438518 P2RX7Q99572 595 aaKnown RBP21.33■■□□□ 1.01
HDAC6-208ENST00000438518 UBA5Q9GZZ9 404 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 JMJD4Q9H9V9 463 aa21.33■■□□□ 1.01
HDAC6-208ENST00000438518 NCOA5Q9HCD5 579 aaKnown RBP21.33■■□□□ 1.01
HDAC6-208ENST00000438518 SEC63Q9UGP8 760 aaKnown RBP21.33■■□□□ 1.01
HDAC6-208ENST00000438518 hCG_1984214I3L0E3 225 aa21.32■■□□□ 1
HDAC6-208ENST00000438518 ZBTB5O15062 677 aa21.32■■□□□ 1
HDAC6-208ENST00000438518 CYTH3O43739 400 aa21.32■■□□□ 1
HDAC6-208ENST00000438518 AKAP17AQ02040 695 aaKnown RBP21.32■■□□□ 1
HDAC6-208ENST00000438518 FUT2Q10981 343 aa21.32■■□□□ 1
HDAC6-208ENST00000438518 DNAJC5GQ8N7S2 189 aa21.32■■□□□ 1
HDAC6-208ENST00000438518 ZNF713Q8N859 430 aaPredicted RBP21.32■■□□□ 1
HDAC6-208ENST00000438518 ATG4CQ96DT6 458 aa21.32■■□□□ 1
HDAC6-208ENST00000438518 ADGRA2Q96PE1 1338 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 PRPF3O43395 683 aaKnown RBP21.31■■□□□ 1
HDAC6-208ENST00000438518 TLR2O60603 784 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 CYP2C8P10632 490 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 COPB2P35606 906 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 HMGN5P82970 282 aaKnown RBP21.31■■□□□ 1
HDAC6-208ENST00000438518 CUL4AQ13619 759 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 CDC37Q16543 378 aaPredicted RBP21.31■■□□□ 1
HDAC6-208ENST00000438518 FAM110CQ1W6H9 321 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 NBPF11Q86T75 865 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 CCDC83Q8IWF9 413 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 NECAB1Q8N987 351 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
HDAC6-208ENST00000438518 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.31■■□□□ 1
HDAC6-208ENST00000438518 PNMA6FA0A0J9YX94 578 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms