RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 FAM43AQ8N2R8 423 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 SLF1Q9BQI6 1058 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 SH2B1Q9NRF2 756 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 MAD2L2Q9UI95 211 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 KLRF2D3W0D1 207 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 PFKFB2O60825 505 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 FDX1P10109 184 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 CPLX2Q6PUV4 134 aaKnown RBP12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 SMCR8Q8TEV9 937 aaPredicted RBP12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 ZIC5Q96T25 663 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 PTPN18Q99952 460 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 HOXC10Q9NYD6 342 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 PPP1R9AQ9ULJ8 1098 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
HLA-DMB-259ENST00000438510 MGAMO43451 1857 aa12.27□□□□□ -0.44
HLA-DMB-259ENST00000438510 CPLX1O14810 134 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 CDKL5O76039 1030 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 HERVK_113P62684 666 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 STK3Q13188 491 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 TAF1CQ15572 869 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 ME3Q16798 604 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 TMTC3Q6ZXV5 915 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 HSCBQ8IWL3 235 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 STAG2Q8N3U4 1231 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 GTF3C6Q969F1 213 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 SNX21Q969T3 373 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 KIFC2Q96AC6 838 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 FBXO28Q9NVF7 368 aa12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 CTDP1Q9Y5B0 961 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMB-259ENST00000438510 BAZ2BQ9UIF8 2168 aaKnown RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 GCLCP48506 637 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 MAP2K1Q02750 393 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 SCRN1Q12765 414 aa12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 TTBK2Q6IQ55 1244 aa12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZFYVE28Q9HCC9 887 aa12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
HLA-DMB-259ENST00000438510 PLXNB2O15031 1838 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 CA12O43570 354 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZBED4O75132 1171 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 PLEKHA8P1O95397 391 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 LARGE1O95461 756 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 CYP2C8P10632 490 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 CDC27P30260 824 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 ADD1P35611 737 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 SLC16A2P36021 539 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 ADGRF4Q8IZF3 695 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 ATG4CQ96DT6 458 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 BEGAINQ9BUH8 593 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 UBA5Q9GZZ9 404 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 RANBP17Q9H2T7 1088 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 RIOX1Q9H6W3 641 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 NCOA5Q9HCD5 579 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 SAGE1Q9NXZ1 904 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 CNTNAP5Q8WYK1 1306 aa12.25□□□□□ -0.45
HLA-DMB-259ENST00000438510 K7ELQ4 463 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 VWA5AO00534 786 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 IFNAR1P17181 557 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 OAZ1P54368 228 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 TRAF1Q13077 416 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 SRBD1Q8N5C6 995 aaKnown RBP12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 NECAB1Q8N987 351 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 RRP36Q96EU6 259 aaKnown RBP12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 TMX3Q96JJ7 454 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 CFHR5Q9BXR6 569 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 RNF26Q9BY78 433 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 ADAMTS5Q9UNA0 930 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 RABGAP1Q9Y3P9 1069 aa12.24□□□□□ -0.45
HLA-DMB-259ENST00000438510 ADGRA2Q96PE1 1338 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 STK36Q9NRP7 1315 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZBTB5O15062 677 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 CYTH3O43739 400 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms