RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 MAP3K14Q99558 947 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 VAT1LQ9HCJ6 419 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 MYH6P13533 1939 aa19.53■□□□□ 0.72
CALD1-209ENST00000436461 MCM2P49736 904 aa19.53■□□□□ 0.72
CALD1-209ENST00000436461 RCAN1P53805 252 aa19.53■□□□□ 0.72
CALD1-209ENST00000436461 TMTC3Q6ZXV5 915 aa19.53■□□□□ 0.72
CALD1-209ENST00000436461 IFNL1Q8IU54 200 aa19.53■□□□□ 0.72
CALD1-209ENST00000436461 SNX21Q969T3 373 aa19.53■□□□□ 0.72
CALD1-209ENST00000436461 ASCC2Q9H1I8 757 aaPredicted RBP19.53■□□□□ 0.72
CALD1-209ENST00000436461 hCG_1642624A0A1W2PR95 340 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 DHX16O60231 1041 aaKnown RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 HOXA7P31268 230 aaPredicted RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 IRX3P78415 501 aaPredicted RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 SREBF2Q12772 1141 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 ANKRD23Q86SG2 305 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 HSCBQ8IWL3 235 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 PHKBQ93100 1093 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 ATG4CQ96DT6 458 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 ZSCAN31Q96LW9 406 aaPredicted RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 SLF1Q9BQI6 1058 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 RBM28Q9NW13 759 aaKnown RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 FEM1BQ9UK73 627 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 PRR12Q9ULL5 1215 aa19.52■□□□□ 0.72
CALD1-209ENST00000436461 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.72
CALD1-209ENST00000436461 K7ELQ4 463 aaPredicted RBP19.51■□□□□ 0.71
CALD1-209ENST00000436461 NTRK3Q16288 839 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 SYDE2Q5VT97 1194 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 POTEEQ6S8J3 1075 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 ADGRF4Q8IZF3 695 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 PPP1R9AQ9ULJ8 1098 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 THSD7BQ9C0I4 1608 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 SMCHD1A6NHR9 2005 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 SPDYE16A6NNV3 312 aaPredicted RBP19.51■□□□□ 0.71
CALD1-209ENST00000436461 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 TAL1P17542 331 aaPredicted RBP19.51■□□□□ 0.71
CALD1-209ENST00000436461 TM4SF4P48230 202 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 COG2Q14746 738 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 BTNL9Q6UXG8 535 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 HOMER1Q86YM7 354 aa19.51■□□□□ 0.71
CALD1-209ENST00000436461 SH2B1Q9NRF2 756 aaPredicted RBP19.51■□□□□ 0.71
CALD1-209ENST00000436461 CPLX1O14810 134 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 OSBPP22059 807 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 DSG3P32926 999 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 FUT2Q10981 343 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 FAM160B2Q86V87 743 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 IL27Q8NEV9 243 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 CHURC1Q8WUH1 139 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
CALD1-209ENST00000436461 CCDC196A0A1B0GTZ2 297 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 JAK2O60674 1132 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 GNAQP50148 359 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 INHBEP58166 350 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 HERVK_113P62684 666 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 PABPC4Q13310 644 aaKnown RBP eCLIP19.49■□□□□ 0.71
CALD1-209ENST00000436461 PRPF38AQ8NAV1 312 aaKnown RBP19.49■□□□□ 0.71
CALD1-209ENST00000436461 PIGSQ96S52 555 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 A0A0G2JMZ2 1700 aa19.49■□□□□ 0.71
CALD1-209ENST00000436461 PLA2G6O60733 806 aa19.48■□□□□ 0.71
CALD1-209ENST00000436461 CCDC174Q6PII3 467 aa19.48■□□□□ 0.71
CALD1-209ENST00000436461 SLC26A6Q9BXS9 759 aa19.48■□□□□ 0.71
CALD1-209ENST00000436461 RIOX1Q9H6W3 641 aa19.48■□□□□ 0.71
CALD1-209ENST00000436461 MAP2K2P36507 400 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 PPP2R5BQ15173 497 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 TAF1CQ15572 869 aaPredicted RBP19.47■□□□□ 0.71
CALD1-209ENST00000436461 CDC37Q16543 378 aaPredicted RBP19.47■□□□□ 0.71
CALD1-209ENST00000436461 NSUN7Q8NE18 718 aaKnown RBP19.47■□□□□ 0.71
CALD1-209ENST00000436461 SMCR8Q8TEV9 937 aaPredicted RBP19.47■□□□□ 0.71
CALD1-209ENST00000436461 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 PAGR1Q9BTK6 254 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 SPZ1Q9BXG8 430 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 PNMA3Q9UL41 463 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 SLC45A1Q9Y2W3 748 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 VWA5AO00534 786 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 IFNAR1P17181 557 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 SLC4A3P48751 1232 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 CPXCR1Q8N123 301 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 SPRYD3Q8NCJ5 442 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 PARK7Q99497 189 aaKnown RBP19.47■□□□□ 0.71
CALD1-209ENST00000436461 LZTS2Q9BRK4 669 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 TXNRD2Q9NNW7 524 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 HOXC10Q9NYD6 342 aa19.47■□□□□ 0.71
CALD1-209ENST00000436461 V9GY48 417 aaPredicted RBP19.47■□□□□ 0.71
CALD1-209ENST00000436461 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 QRICH1Q2TAL8 776 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 OTUD7BQ6GQQ9 843 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 DNAJC5GQ8N7S2 189 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 RANBP17Q9H2T7 1088 aaKnown RBP19.46■□□□□ 0.71
CALD1-209ENST00000436461 R3HDMLQ9H3Y0 253 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 SLC38A10Q9HBR0 1119 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 RAVER2Q9HCJ3 691 aaKnown RBP19.46■□□□□ 0.71
CALD1-209ENST00000436461 BTBD7Q9P203 1132 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 ADAMTS5Q9UNA0 930 aa19.46■□□□□ 0.71
CALD1-209ENST00000436461 PPP1R11O60927 126 aaPredicted RBP19.45■□□□□ 0.7
CALD1-209ENST00000436461 ANP32AP39687 249 aaKnown RBP19.45■□□□□ 0.7
CALD1-209ENST00000436461 CRHR2Q13324 411 aa19.45■□□□□ 0.7
CALD1-209ENST00000436461 CUL4AQ13619 759 aa19.45■□□□□ 0.7
CALD1-209ENST00000436461 TMEM132BQ14DG7 1078 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms