RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-214ENST00000435747 ZNF536O15090 1300 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 ASGR1P07306 291 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 COG2Q14746 738 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 PRSS33Q8NF86 280 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 SSH3Q8TE77 659 aa12.71□□□□□ -0.37
CPNE1-214ENST00000435747 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
CPNE1-214ENST00000435747 FOCADQ5VW36 1801 aa12.71□□□□□ -0.38
CPNE1-214ENST00000435747 MYADML2A6NDP7 307 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 CD4P01730 458 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 C6orf222P0C671 652 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-214ENST00000435747 KCNA5P22460 613 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-214ENST00000435747 TAP1Q03518 808 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-214ENST00000435747 MB21D1Q8N884 522 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-214ENST00000435747 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 TGFBRAP1Q8WUH2 860 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 MMP19Q99542 508 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 LMCD1Q9NZU5 365 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 FAM184BQ9ULE4 1060 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
CPNE1-214ENST00000435747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-214ENST00000435747 PGK2P07205 417 aa12.69□□□□□ -0.38
CPNE1-214ENST00000435747 ERMP1Q7Z2K6 904 aa12.69□□□□□ -0.38
CPNE1-214ENST00000435747 PRRX2Q99811 253 aa12.69□□□□□ -0.38
CPNE1-214ENST00000435747 DIS3Q9Y2L1 958 aaKnown RBP12.69□□□□□ -0.38
CPNE1-214ENST00000435747 DCHS1Q96JQ0 3298 aa12.69□□□□□ -0.38
CPNE1-214ENST00000435747 FLT1P17948 1338 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 LPXNO60711 386 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 DUSP11O75319 330 aaKnown RBP12.68□□□□□ -0.38
CPNE1-214ENST00000435747 BAG3O95817 575 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 PLCG2P16885 1265 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-214ENST00000435747 ATP8B2P98198 1209 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 TTLL4Q14679 1199 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 SLC9A7Q96T83 725 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 WNT8AQ9H1J5 351 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
CPNE1-214ENST00000435747 SAP30BPQ9UHR5 308 aaKnown RBP12.68□□□□□ -0.38
CPNE1-214ENST00000435747 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-214ENST00000435747 AKAP2Q9Y2D5 859 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 MYO15AQ9UKN7 3530 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 MYH1P12882 1939 aa12.68□□□□□ -0.38
CPNE1-214ENST00000435747 MCM3APO60318 1980 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 ARHGEF15O94989 841 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 PFKMP08237 780 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-214ENST00000435747 KCTD2Q14681 263 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
CPNE1-214ENST00000435747 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 PUS10Q3MIT2 529 aaKnown RBP12.67□□□□□ -0.38
CPNE1-214ENST00000435747 GNASQ5JWF2 1037 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 GDPD5Q8WTR4 605 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 NOC4LQ9BVI4 516 aaKnown RBP12.67□□□□□ -0.38
CPNE1-214ENST00000435747 GPR108Q9NPR9 543 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 HMG20BQ9P0W2 317 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 NOP58Q9Y2X3 529 aaKnown RBP12.67□□□□□ -0.38
CPNE1-214ENST00000435747 SCN5AQ14524 2016 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
CPNE1-214ENST00000435747 SLC25A27O95847 323 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 ABCB5Q2M3G0 1257 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 IER5LQ5T953 404 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 SCLYQ96I15 445 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
CPNE1-214ENST00000435747 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
CPNE1-214ENST00000435747 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-214ENST00000435747 ACTN1P12814 892 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 DSG3P32926 999 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 MCAMP43121 646 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 GJA9P57773 515 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 TCF15Q12870 199 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-214ENST00000435747 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 MSL3Q8N5Y2 521 aaKnown RBP12.65□□□□□ -0.38
CPNE1-214ENST00000435747 SPATA5Q8NB90 893 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.38
CPNE1-214ENST00000435747 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
CPNE1-214ENST00000435747 CHD8Q9HCK8 2581 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 FLOT1O75955 427 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 ZP2Q05996 745 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 G3BP1Q13283 466 aaKnown RBP eCLIP12.64□□□□□ -0.395e-8■□□□□ 9.2
CPNE1-214ENST00000435747 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms