RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.2
LINC00028-201ENST00000435497 TOX2Q96NM4 488 aa16.33■□□□□ 0.2
LINC00028-201ENST00000435497 TMEM39AQ9NV64 488 aa16.33■□□□□ 0.2
LINC00028-201ENST00000435497 DNAJC25-GNG10A0A024R161 153 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 MYADML2A6NDP7 307 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 MCM3APO60318 1980 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 RASA1P20936 1047 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 COPB2P35606 906 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 KCNA10Q16322 511 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 MAMDC4Q6UXC1 1216 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
LINC00028-201ENST00000435497 STRBPQ96SI9 672 aaKnown RBP16.32■□□□□ 0.2
LINC00028-201ENST00000435497 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 CNPY2Q9Y2B0 182 aa16.32■□□□□ 0.2
LINC00028-201ENST00000435497 TMEM265A0A087WTH1 108 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 F5H6K3 240 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 MS4A1P11836 297 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 FOSL2P15408 326 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 FPGSQ05932 587 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 KLRC3Q07444 240 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 GRIN2CQ14957 1233 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
LINC00028-201ENST00000435497 STK11IPQ8N1F8 1099 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 STARD7Q9NQZ5 370 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 FAM184BQ9ULE4 1060 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
LINC00028-201ENST00000435497 SYNGAP1Q96PV0 1343 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 ADCY6O43306 1168 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
LINC00028-201ENST00000435497 NDUFB10O96000 172 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 CDK7P50613 346 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 C16orf59Q7L2K0 433 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 MIER1Q8N108 512 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
LINC00028-201ENST00000435497 DDX11Q96FC9 970 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 FGD4Q96M96 766 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
LINC00028-201ENST00000435497 TBX21Q9UL17 535 aa16.3■□□□□ 0.2
LINC00028-201ENST00000435497 IGKV6D-41A0A0C4DH26 115 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.29■□□□□ 0.2
LINC00028-201ENST00000435497 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.29■□□□□ 0.2
LINC00028-201ENST00000435497 MOXD2PA6NHM9 499 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 DCDC2CA8MYV0 355 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 DUSP11O75319 330 aaKnown RBP16.29■□□□□ 0.2
LINC00028-201ENST00000435497 TIMP1P01033 207 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00028-201ENST00000435497 CPXCR1Q8N123 301 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
LINC00028-201ENST00000435497 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00028-201ENST00000435497 ZHX1Q9UKY1 873 aaPredicted RBP16.29■□□□□ 0.2
LINC00028-201ENST00000435497 DNAJB2P25686 324 aa16.28■□□□□ 0.2
LINC00028-201ENST00000435497 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
LINC00028-201ENST00000435497 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
LINC00028-201ENST00000435497 ZNF467Q7Z7K2 595 aaPredicted RBP16.28■□□□□ 0.2
LINC00028-201ENST00000435497 OSBP2Q969R2 916 aa16.28■□□□□ 0.2
LINC00028-201ENST00000435497 MKL1Q969V6 931 aa16.28■□□□□ 0.2
LINC00028-201ENST00000435497 MKNK2Q9HBH9 465 aa16.28■□□□□ 0.2
LINC00028-201ENST00000435497 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
LINC00028-201ENST00000435497 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
LINC00028-201ENST00000435497 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
LINC00028-201ENST00000435497 MYH4Q9Y623 1939 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 ELP1O95163 1332 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 CTAGE5O15320 804 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 ZBED4O75132 1171 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 TMEM240Q5SV17 173 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 MFSD5Q6N075 450 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 GIMAP6Q6P9H5 292 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
LINC00028-201ENST00000435497 SLC38A10Q9HBR0 1119 aa16.27■□□□□ 0.2
LINC00028-201ENST00000435497 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.2
LINC00028-201ENST00000435497 ASGR1P07306 291 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 C6orf222P0C671 652 aaPredicted RBP16.26■□□□□ 0.19
LINC00028-201ENST00000435497 GJA9P57773 515 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 RASIP1Q5U651 963 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 KATNBL1Q9H079 304 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 ABHD16BQ9H3Z7 469 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 ZNF576Q9H609 170 aa16.26■□□□□ 0.19
LINC00028-201ENST00000435497 MUC3AQ02505 3323 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 GRXCR1A8MXD5 290 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 ARVCFO00192 962 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 PRDM1O75626 825 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 PBX2P40425 430 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 ARMCX2Q7L311 632 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
LINC00028-201ENST00000435497 PCSK9Q8NBP7 692 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms