RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
PCOTH-203ENST00000435039 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
PCOTH-203ENST00000435039 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.31
PCOTH-203ENST00000435039 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
PCOTH-203ENST00000435039 PLA2G6O60733 806 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
PCOTH-203ENST00000435039 PTPRAP18433 802 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 PTMSP20962 102 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 USP14P54578 494 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
PCOTH-203ENST00000435039 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCOTH-203ENST00000435039 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 PPP1R18Q6NYC8 613 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 CCDC12Q8WUD4 166 aaPredicted RBP13.08□□□□□ -0.32
PCOTH-203ENST00000435039 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 HHIPL1Q96JK4 782 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
PCOTH-203ENST00000435039 RAD21O60216 631 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 MCM4P33991 863 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 STAT2P52630 851 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 VGLL4Q14135 290 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 ZKSCAN4Q969J2 545 aaPredicted RBP13.07□□□□□ -0.32
PCOTH-203ENST00000435039 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 ZNF408Q9H9D4 720 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 BARHL2Q9NY43 387 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 ISY1Q9ULR0 285 aaKnown RBP13.07□□□□□ -0.32
PCOTH-203ENST00000435039 CSADQ9Y600 493 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 SNCAIPQ9Y6H5 919 aa13.07□□□□□ -0.32
PCOTH-203ENST00000435039 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
PCOTH-203ENST00000435039 TCHHQ07283 1943 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 hCG_1642624A0A1W2PR95 340 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 UNCXA6NJT0 531 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 USP17L10C9JJH3 530 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 STXBP3O00186 592 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCOTH-203ENST00000435039 CALML3P27482 149 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 WWC2Q6AWC2 1192 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 OTUD7BQ6GQQ9 843 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.06□□□□□ -0.32
PCOTH-203ENST00000435039 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
PCOTH-203ENST00000435039 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
PCOTH-203ENST00000435039 ANKRD13AQ8IZ07 590 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 ADGRF4Q8IZF3 695 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 SHISA4Q96DD7 197 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 PIGSQ96S52 555 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 FOXP1Q9H334 677 aaPredicted RBP13.06□□□□□ -0.32
PCOTH-203ENST00000435039 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 JMJD4Q9H9V9 463 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 TSKSQ9UJT2 592 aa13.06□□□□□ -0.32
PCOTH-203ENST00000435039 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 ZBTB5O15062 677 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 KRT2P35908 639 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 BACE1P56817 501 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 KRT85P78386 507 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 MTMR2Q13614 643 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
PCOTH-203ENST00000435039 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
PCOTH-203ENST00000435039 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 FAM83BQ5T0W9 1011 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 TTBK2Q6IQ55 1244 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 ARMC9Q7Z3E5 817 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 HEATR3Q7Z4Q2 680 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 GPKOWQ92917 476 aaPredicted RBP eCLIP13.05□□□□□ -0.32
PCOTH-203ENST00000435039 NUP88Q99567 741 aaPredicted RBP13.05□□□□□ -0.32
PCOTH-203ENST00000435039 FEM1BQ9UK73 627 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
PCOTH-203ENST00000435039 KIF28PB7ZC32 967 aa13.04□□□□□ -0.32
PCOTH-203ENST00000435039 C19orf81C9J6K1 198 aa13.04□□□□□ -0.32
PCOTH-203ENST00000435039 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
PCOTH-203ENST00000435039 CA12O43570 354 aa13.04□□□□□ -0.32
PCOTH-203ENST00000435039 VCAM1P19320 739 aa13.04□□□□□ -0.32
PCOTH-203ENST00000435039 SLC16A2P36021 539 aa13.04□□□□□ -0.32
PCOTH-203ENST00000435039 NAPAP54920 295 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms