RNA–Protein interactions for RNA: ENST00000434583.5

TRNT1-208, Transcript of tRNA nucleotidyl transferase 1, human

TSL 2

Gene TRNT1, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRNT1-208	ENST00000434583	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.8	□□□□□ -0.52
TRNT1-208	ENST00000434583	PPP1R12C	Q9BZL4	782 aa		11.8	□□□□□ -0.52
TRNT1-208	ENST00000434583	GTPBP6	O43824	516 aa	Predicted RBP	11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	SNAI1	O95863	264 aa	Predicted RBP	11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	CD4	P01730	458 aa		11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	C6orf222	P0C671	652 aa	Predicted RBP	11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	GJA9	P57773	515 aa		11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	OS9	Q13438	667 aa	Predicted RBP	11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	PPP2R2D	Q66LE6	453 aa		11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	RIOK1	Q9BRS2	568 aa	Known RBP	11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	LRRC37A2	A6NM11	1700 aa		11.79	□□□□□ -0.52
TRNT1-208	ENST00000434583	MAGEB6P1	A0A0J9YX57	407 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	VWA5A	O00534	786 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	KCNQ1	P51787	676 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	NKX3-2	P78367	333 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	TFF2	Q03403	129 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	ICA1	Q05084	483 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	SKIV2L	Q15477	1246 aa	Known RBP	11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	TRMT2A	Q8IZ69	625 aa	Known RBP	11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	MICALL1	Q8N3F8	863 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	DDX11	Q96FC9	970 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	ABHD16B	Q9H3Z7	469 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	MCM9	Q9NXL9	1143 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	ZNF214	Q9UL59	606 aa	Predicted RBP	11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	SLC4A7	Q9Y6M7	1214 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	CDH23	Q9H251	3354 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	CABYR	O75952	493 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	CYP2C18	P33260	490 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	ACVR2B	Q13705	512 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	POLA2	Q14181	598 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	GNAS	Q5JWF2	1037 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	SIAH1	Q8IUQ4	282 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	SPICE1	Q8N0Z3	855 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	HIPK3	Q9H422	1215 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	PPP1R9A	Q9ULJ8	1098 aa		11.78	□□□□□ -0.52
TRNT1-208	ENST00000434583	MCM3AP	O60318	1980 aa		11.77	□□□□□ -0.52
TRNT1-208	ENST00000434583	DNAJC25-GNG10	A0A024R161	153 aa		11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	MYADML2	A6NDP7	307 aa		11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	TLL1	O43897	1013 aa		11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	SLC43A3	Q8NBI5	491 aa		11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	REPS2	Q8NFH8	660 aa		11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	GOPC	Q9HD26	462 aa		11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	DBNL	Q9UJU6	430 aa	Known RBP	11.77	□□□□□ -0.53
TRNT1-208	ENST00000434583	IPO8	O15397	1037 aa	Known RBP	11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	TTF1	Q15361	905 aa	Predicted RBP	11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	OTOP2	Q7RTS6	562 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	SSH3	Q8TE77	659 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	TEX13B	Q9BXU2	312 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	MTCH2	Q9Y6C9	303 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	SURF6	O75683	361 aa	Known RBP	11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	PFKM	P08237	780 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	CCDC144B	Q3MJ40	725 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	KANSL2	Q9H9L4	492 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	FBXO28	Q9NVF7	368 aa		11.76	□□□□□ -0.53
TRNT1-208	ENST00000434583	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	MUC3A	Q02505	3323 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	PI4K2B	G5E9Z4	385 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	AKR1B1	P15121	316 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	RABGGTB	P53611	331 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	RARS	P54136	660 aa	Known RBP	11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	ATP8B2	P98198	1209 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	TMEM67	Q5HYA8	995 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	HLA-C	Q95604	372 aa		11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	NOP58	Q9Y2X3	529 aa	Known RBP	11.75	□□□□□ -0.53
TRNT1-208	ENST00000434583	ATP2A1	O14983	1001 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	ATP2A2	P16615	1042 aa	Known RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	ALYREF	Q86V81	257 aa	Known RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	NOC4L	Q9BVI4	516 aa	Known RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	ANTXR1	Q9H6X2	564 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	FBXO40	Q9UH90	709 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	ZEB2	O60315	1214 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	EEF2	P13639	858 aa	Known RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	ITGA7	Q13683	1181 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	SNRNP48	Q6IEG0	339 aa	Known RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	AMOTL1	Q8IY63	956 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	EAF2	Q96CJ1	260 aa	Predicted RBP	11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	SLF1	Q9BQI6	1058 aa		11.74	□□□□□ -0.53
TRNT1-208	ENST00000434583	ZBBX	A8MT70	800 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	PRR33	A8MZF0	331 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	CTAGE5	O15320	804 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	ADCY6	O43306	1168 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	MYOG	P15173	224 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	CCL23	P55773	120 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	IRX5	P78411	483 aa	Predicted RBP	11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	SLC9C2	Q5TAH2	1124 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	CLEC10A	Q8IUN9	316 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	PRPF38A	Q8NAV1	312 aa	Known RBP	11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	PHOSPHO2	Q8TCD6	241 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	DYNLL2	Q96FJ2	89 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	C11orf16	Q9NQ32	467 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	ATP8A2	Q9NTI2	1148 aa		11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	TLR7	Q9NYK1	1049 aa	Known RBP	11.73	□□□□□ -0.53
TRNT1-208	ENST00000434583	UMODL1	Q5DID0	1318 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms