RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 SMNDC1O75940 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC01090-202ENST00000434418 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
LINC01090-202ENST00000434418 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
LINC01090-202ENST00000434418 CCDC74AQ96AQ1 378 aa12.84□□□□□ -0.35
LINC01090-202ENST00000434418 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
LINC01090-202ENST00000434418 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
LINC01090-202ENST00000434418 LTBP1Q14766 1721 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
LINC01090-202ENST00000434418 APAF1O14727 1248 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 EPHX2P34913 555 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 GSK3AP49840 483 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
LINC01090-202ENST00000434418 HSP90AB3PQ58FF7 597 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 PI16Q6UXB8 463 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 LDHDQ86WU2 507 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 DMRTC2Q8IXT2 367 aaPredicted RBP12.83□□□□□ -0.36
LINC01090-202ENST00000434418 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
LINC01090-202ENST00000434418 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
LINC01090-202ENST00000434418 A0A1W2PP55 124 aa12.82□□□□□ -0.36
LINC01090-202ENST00000434418 AOC3Q16853 763 aa12.82□□□□□ -0.36
LINC01090-202ENST00000434418 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
LINC01090-202ENST00000434418 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
LINC01090-202ENST00000434418 GPC2Q8N158 579 aa12.82□□□□□ -0.36
LINC01090-202ENST00000434418 EPS8L3Q8TE67 593 aaKnown RBP12.82□□□□□ -0.36
LINC01090-202ENST00000434418 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
LINC01090-202ENST00000434418 PDE2AO00408 941 aaPredicted RBP12.81□□□□□ -0.36
LINC01090-202ENST00000434418 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
LINC01090-202ENST00000434418 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
LINC01090-202ENST00000434418 HOXB7P09629 217 aa12.81□□□□□ -0.36
LINC01090-202ENST00000434418 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
LINC01090-202ENST00000434418 WFDC8Q8IUA0 241 aa12.81□□□□□ -0.36
LINC01090-202ENST00000434418 NPAS4Q8IUM7 802 aa12.81□□□□□ -0.36
LINC01090-202ENST00000434418 IL22RA1Q8N6P7 574 aa12.81□□□□□ -0.36
LINC01090-202ENST00000434418 PLBD2Q8NHP8 589 aa12.81□□□□□ -0.36
LINC01090-202ENST00000434418 DBF4Q9UBU7 674 aaPredicted RBP12.81□□□□□ -0.36
LINC01090-202ENST00000434418 COL4A1P02462 1669 aa12.8□□□□□ -0.36
LINC01090-202ENST00000434418 METTL12A8MUP2 240 aa12.8□□□□□ -0.36
LINC01090-202ENST00000434418 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
LINC01090-202ENST00000434418 CCDC184Q52MB2 194 aa12.8□□□□□ -0.36
LINC01090-202ENST00000434418 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
LINC01090-202ENST00000434418 NIM1KQ8IY84 436 aa12.8□□□□□ -0.36
LINC01090-202ENST00000434418 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
LINC01090-202ENST00000434418 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
LINC01090-202ENST00000434418 PASKQ96RG2 1323 aa12.8□□□□□ -0.36
LINC01090-202ENST00000434418 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
LINC01090-202ENST00000434418 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
LINC01090-202ENST00000434418 CDC25BP30305 580 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 DPP8Q6V1X1 898 aaPredicted RBP12.79□□□□□ -0.36
LINC01090-202ENST00000434418 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
LINC01090-202ENST00000434418 TMEM102Q8N9M5 508 aaPredicted RBP12.79□□□□□ -0.36
LINC01090-202ENST00000434418 NXPE3Q969Y0 559 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 FAM89AQ96GI7 184 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
LINC01090-202ENST00000434418 PIK3R2O00459 728 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 EPS15P42566 896 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 GRAPQ13588 217 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 TXNDC11Q6PKC3 985 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
LINC01090-202ENST00000434418 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
LINC01090-202ENST00000434418 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
LINC01090-202ENST00000434418 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 PCNTO95613 3336 aa12.78□□□□□ -0.36
LINC01090-202ENST00000434418 BBOX1O75936 387 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 PTPRAP18433 802 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 EPHA1P21709 976 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 GNAI1P63096 354 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 C8orf58Q8NAV2 365 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 TCF12Q99081 682 aa12.77□□□□□ -0.37
LINC01090-202ENST00000434418 NOP53Q9NZM5 478 aaKnown RBP12.77□□□□□ -0.37
LINC01090-202ENST00000434418 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 CDC27P30260 824 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
LINC01090-202ENST00000434418 KCNMA1Q12791 1236 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 SUPT20HQ8NEM7 779 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
LINC01090-202ENST00000434418 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
LINC01090-202ENST00000434418 RTFDC1Q9BY42 306 aaPredicted RBP12.76□□□□□ -0.37
LINC01090-202ENST00000434418 BHLHE41Q9C0J9 482 aaPredicted RBP12.76□□□□□ -0.37
LINC01090-202ENST00000434418 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 ZNRF3Q9ULT6 936 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
LINC01090-202ENST00000434418 GADD45BO75293 160 aaPredicted RBP12.75□□□□□ -0.37
LINC01090-202ENST00000434418 RAD17O75943 681 aa12.75□□□□□ -0.37
LINC01090-202ENST00000434418 CXCL9Q07325 125 aa12.75□□□□□ -0.37
LINC01090-202ENST00000434418 KIAA0319Q5VV43 1072 aa12.75□□□□□ -0.37
LINC01090-202ENST00000434418 TSPYL6Q8N831 410 aa12.75□□□□□ -0.37
LINC01090-202ENST00000434418 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
LINC01090-202ENST00000434418 MYD88Q99836 296 aa12.75□□□□□ -0.37
LINC01090-202ENST00000434418 EHD4Q9H223 541 aa12.75□□□□□ -0.37
LINC01090-202ENST00000434418 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms