RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ZSWIM5Q9P217 1185 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 KCNH3Q9ULD8 1083 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 CDK13Q14004 1512 aaKnown RBP8.54□□□□□ -1.04
HDAC9-213ENST00000433709 SCAPERQ9BY12 1400 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 SSBP05455 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDAC9-213ENST00000433709 RNF4P78317 190 aa8.53□□□□□ -1.04
HDAC9-213ENST00000433709 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
HDAC9-213ENST00000433709 DUSP15Q9H1R2 295 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-213ENST00000433709 SUCOQ9UBS9 1254 aaKnown RBP8.53□□□□□ -1.04
HDAC9-213ENST00000433709 LTBP3Q9NS15 1303 aa8.53□□□□□ -1.04
HDAC9-213ENST00000433709 ZNF518AQ6AHZ1 1483 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 A0A1W2PQH9 124 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 C9IYK1 514 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 PPP2R5EQ16537 467 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 ASB11Q8WXH4 323 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 DHRS1Q96LJ7 313 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 GMLQ99445 158 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 ZMYM4Q5VZL5 1548 aa8.52□□□□□ -1.05
HDAC9-213ENST00000433709 MYO5CQ9NQX4 1742 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 ARHGAP5Q13017 1502 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 ZFYVE16Q7Z3T8 1539 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 ETFBP38117 255 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 GP2P55259 537 aaKnown RBP8.51□□□□□ -1.05
HDAC9-213ENST00000433709 SNW1Q13573 536 aaKnown RBP8.51□□□□□ -1.05
HDAC9-213ENST00000433709 NBPF9Q3BBW0 867 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 TDRD10Q5VZ19 366 aaKnown RBP8.51□□□□□ -1.05
HDAC9-213ENST00000433709 NBPF11Q86T75 865 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 TP53INP2Q8IXH6 220 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 GPR62Q9BZJ7 368 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
HDAC9-213ENST00000433709 FAM86C1Q9NVL1 165 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 TTC37Q6PGP7 1564 aa8.51□□□□□ -1.05
HDAC9-213ENST00000433709 ARHGEF40Q8TER5 1519 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 SHISA3A0PJX4 238 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 SMAD7O15105 426 aaKnown RBP8.5□□□□□ -1.05
HDAC9-213ENST00000433709 SRFP11831 508 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 PMS1P54277 932 aaKnown RBP8.5□□□□□ -1.05
HDAC9-213ENST00000433709 IKZF1Q13422 519 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 PPFIBP1Q86W92 1011 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 C19orf47Q8N9M1 422 aaKnown RBP8.5□□□□□ -1.05
HDAC9-213ENST00000433709 PCDHB10Q9UN67 800 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 ATP10AO60312 1499 aa8.5□□□□□ -1.05
HDAC9-213ENST00000433709 TP53P04637 393 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-213ENST00000433709 CASP7P55210 303 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 TMC3Q7Z5M5 1100 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 PRDM14Q9GZV8 571 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 ZNF408Q9H9D4 720 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 GPATCH2Q9NW75 528 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 ZNF214Q9UL59 606 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-213ENST00000433709 OAS3Q9Y6K5 1087 aaKnown RBP8.49□□□□□ -1.05
HDAC9-213ENST00000433709 PLEKHH2Q8IVE3 1493 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 RICTORQ6R327 1708 aa8.49□□□□□ -1.05
HDAC9-213ENST00000433709 MTUS2Q5JR59 1369 aa8.48□□□□□ -1.05
HDAC9-213ENST00000433709 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
HDAC9-213ENST00000433709 TPP2P29144 1249 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-213ENST00000433709 NMIQ13287 307 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-213ENST00000433709 AUHQ13825 339 aaKnown RBP8.48□□□□□ -1.05
HDAC9-213ENST00000433709 ABI1Q8IZP0 508 aa8.48□□□□□ -1.05
HDAC9-213ENST00000433709 TRIT1Q9H3H1 467 aaKnown RBP8.48□□□□□ -1.05
HDAC9-213ENST00000433709 PTPRMP28827 1452 aa8.48□□□□□ -1.05
HDAC9-213ENST00000433709 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
HDAC9-213ENST00000433709 ADAMTSL3P82987 1691 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 GAB4Q2WGN9 574 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 AXDND1Q5T1B0 1012 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-213ENST00000433709 ANGEL2Q5VTE6 544 aaKnown RBP8.47□□□□□ -1.05
HDAC9-213ENST00000433709 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 TSPYL5Q86VY4 417 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-213ENST00000433709 CARS2Q9HA77 564 aaKnown RBP8.47□□□□□ -1.05
HDAC9-213ENST00000433709 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 CFDP1Q9UEE9 299 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-213ENST00000433709 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 SLC12A7Q9Y666 1083 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 PCF11O94913 1555 aaKnown RBP8.47□□□□□ -1.05
HDAC9-213ENST00000433709 CCNB3Q8WWL7 1395 aa8.47□□□□□ -1.05
HDAC9-213ENST00000433709 BCORL1Q5H9F3 1711 aa8.46□□□□□ -1.05
HDAC9-213ENST00000433709 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
HDAC9-213ENST00000433709 ESR1P03372 595 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 FUT4P22083 530 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 ZP2Q05996 745 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 PLCL1Q15111 1095 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 CLEC16AQ2KHT3 1053 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 GNPTABQ3T906 1256 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 CREG2Q8IUH2 290 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 C7orf61Q8IZ16 206 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 ASCC2Q9H1I8 757 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-213ENST00000433709 PHAXQ9H814 394 aaKnown RBP8.46□□□□□ -1.06
HDAC9-213ENST00000433709 PRKAG3Q9UGI9 489 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 KIAA1107Q9UPP5 1409 aa8.46□□□□□ -1.06
HDAC9-213ENST00000433709 SHOXO15266 292 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 TMPRSS7Q7RTY8 843 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 AFAP1Q8N556 730 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 AGBL5Q8NDL9 886 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 TANGO6Q9C0B7 1094 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 ADAMTS6Q9UKP5 1117 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 PCDHB12Q9Y5F1 795 aa8.45□□□□□ -1.06
HDAC9-213ENST00000433709 KDM5CP41229 1560 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms