RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 ANTXR2P58335 489 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 SF3B3Q15393 1217 aaKnown RBP13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 STAG2Q8N3U4 1231 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 RDH13Q8NBN7 331 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 PRPF4BQ13523 1007 aaKnown RBP13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 TPH2Q8IWU9 490 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 TXLNBQ8N3L3 684 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 CEP95Q96GE4 821 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 DESI2Q9BSY9 194 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 UBR1Q8IWV7 1749 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 USP17L5A8MUK1 530 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 TMCO5BA8MYB1 307 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 BARGINQ6ZT62 677 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 SUPT20HQ8NEM7 779 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 MRFAP1L1Q96HT8 127 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 KCNF1Q9H3M0 494 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 SYNRGQ9UMZ2 1314 aa13.99□□□□□ -0.17
LRRTM1-206ENST00000433224 PLCD1P51178 756 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 TBC1D16Q8TBP0 767 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 STAG1Q8WVM7 1258 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 GINS2Q9Y248 185 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 GH2P01242 217 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 TTLL6Q8N841 843 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 TBCKQ8TEA7 893 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 DDAH1O94760 285 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 NEK11Q8NG66 645 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 FERMT2Q96AC1 680 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 SLC39A2Q9NP94 309 aa13.98□□□□□ -0.17
LRRTM1-206ENST00000433224 KIAA0754O94854 1291 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 NEK8Q86SG6 692 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 PAGR1Q9BTK6 254 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 GOLPH3LQ9H4A5 285 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 PCDHA12Q9UN75 941 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 H7C1D1 291 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 CRKP46108 304 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 SPAG1Q07617 926 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 NOC4LQ9BVI4 516 aaKnown RBP13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 COA1Q9GZY4 146 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 C3P01024 1663 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 USP27XA6NNY8 438 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 PAK1Q13153 545 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 ADGRB2O60241 1585 aa13.97□□□□□ -0.17
LRRTM1-206ENST00000433224 TTLL1O95922 423 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 ATP1A3P13637 1013 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 RAPGEF1Q13905 1077 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 SEPT2Q15019 361 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 CC2D2BQ6DHV5 1058 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 FAM114A1Q8IWE2 563 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 TAF4BQ92750 862 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 BRIP1Q9BX63 1249 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 POLR3EQ9NVU0 708 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 FLOT1O75955 427 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 CCDC84Q86UT8 332 aaPredicted RBP13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 CTAGE1Q96RT6 745 aa13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 RPAP1Q9BWH6 1393 aaPredicted RBP13.96□□□□□ -0.17
LRRTM1-206ENST00000433224 ECE2O60344 883 aa13.96□□□□□ -0.18
LRRTM1-206ENST00000433224 FBXO11Q86XK2 927 aa13.96□□□□□ -0.18
LRRTM1-206ENST00000433224 MLKLQ8NB16 471 aa13.96□□□□□ -0.18
LRRTM1-206ENST00000433224 PRM3Q9NNZ6 103 aa13.96□□□□□ -0.18
LRRTM1-206ENST00000433224 TESPA1A2RU30 521 aaPredicted RBP13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 CCDC169A6NNP5 214 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 FBXO38Q6PIJ6 1188 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 CTAGE9A4FU28 777 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 MEIS1O00470 390 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 FOXN1O15353 648 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 OAS2P29728 719 aaKnown RBP13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 LRRC41Q15345 812 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 ADGRA1Q86SQ6 560 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 CERS3Q8IU89 383 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 CCDC42Q96M95 316 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 FAM207AQ9NSI2 230 aaPredicted RBP13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 SPTLC3Q9NUV7 552 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 SEC31AO94979 1220 aaKnown RBP13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 AKR1B1P15121 316 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 KRT9P35527 623 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 MAP9Q49MG5 647 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 PSMB7Q99436 277 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 FOXP1Q9H334 677 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms