RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 PUF60Q9UHX1 559 aaKnown RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 PRPF3O43395 683 aaKnown RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 MFAP3LO75121 409 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 BMP15O95972 392 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 OAS2P29728 719 aaKnown RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 TXLNAP40222 546 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 NOM1Q5C9Z4 860 aaKnown RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 ZNF569Q5MCW4 686 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 TTC38Q5R3I4 469 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 CDKAL1Q5VV42 579 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 TSPY2A6NKD2 308 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 PTGDRQ13258 359 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 SH3RF1Q7Z6J0 888 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 WDR66Q8TBY9 1149 aa11.91□□□□□ -0.5
SMPD4-206ENST00000433118 ZCCHC17Q9NP64 241 aaKnown RBP11.91□□□□□ -0.5
SMPD4-206ENST00000433118 COL24A1Q17RW2 1714 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-206ENST00000433118 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 RBM28Q9NW13 759 aaKnown RBP11.9□□□□□ -0.5
SMPD4-206ENST00000433118 MYH8P13535 1937 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 N4BP3O15049 544 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-206ENST00000433118 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
SMPD4-206ENST00000433118 GYPCP04921 128 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 PBX1P40424 430 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 FXR1P51114 621 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMPD4-206ENST00000433118 SPTY2D1Q68D10 685 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-206ENST00000433118 SRGAP1Q7Z6B7 1085 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CALCOCO1Q9P1Z2 691 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 BBOX1O75936 387 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 BTDP43251 543 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 FUT2Q10981 343 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 JAKMIP3Q5VZ66 844 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 ACRBPQ8NEB7 543 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 NUP88Q99567 741 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-206ENST00000433118 PDGFDQ9GZP0 370 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-206ENST00000433118 VPS16Q9H269 839 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CALM1P0DP23 149 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CALM2P0DP24 149 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CALM3P0DP25 149 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 ATP2B4P23634 1241 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 PICALMQ13492 652 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 LONRF2Q1L5Z9 754 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 RASGRP2Q7LDG7 609 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-206ENST00000433118 MKNK2Q9HBH9 465 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CDC23Q9UJX2 597 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 A0A1B0GUL6 1792 aa11.89□□□□□ -0.51
SMPD4-206ENST00000433118 CTAGE9A4FU28 777 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 G3V3G9 751 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 MCM7P33993 719 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 SCNN1DP51172 638 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 NLRP5P59047 1200 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 TROAPQ12815 778 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 KRT31Q15323 416 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 ANKRD20A12PQ8NF67 263 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 NEK11Q8NG66 645 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 FUT8Q9BYC5 575 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-206ENST00000433118 TFAP4Q01664 338 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 EZH2Q15910 746 aaKnown RBP11.88□□□□□ -0.51
SMPD4-206ENST00000433118 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 SRGNP10124 158 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 CDC25AP30304 524 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 CHRNA5P30532 468 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 TMTC3Q6ZXV5 915 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 SLC35F6Q8N357 371 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 CCDC51Q96ER9 411 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 ZC3H12CQ9C0D7 883 aaKnown RBP11.88□□□□□ -0.51
SMPD4-206ENST00000433118 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 TAB2Q9NYJ8 693 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
SMPD4-206ENST00000433118 MAPK8IP1Q9UQF2 711 aa11.88□□□□□ -0.51
SMPD4-206ENST00000433118 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
SMPD4-206ENST00000433118 BAG3O95817 575 aa11.87□□□□□ -0.51
SMPD4-206ENST00000433118 SLURP2P0DP57 97 aa11.87□□□□□ -0.51
SMPD4-206ENST00000433118 PAK1Q13153 545 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms