RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 FGD1P98174 961 aa21.52■■□□□ 1.04
RFTN1-202ENST00000431547 IKQ13123 557 aaPredicted RBP21.52■■□□□ 1.04
RFTN1-202ENST00000431547 GRM4Q14833 912 aa21.52■■□□□ 1.04
RFTN1-202ENST00000431547 Q3C1V9 767 aa21.52■■□□□ 1.04
RFTN1-202ENST00000431547 Q6ZUG5 572 aa21.52■■□□□ 1.04
RFTN1-202ENST00000431547 ERO1AQ96HE7 468 aa21.52■■□□□ 1.04
RFTN1-202ENST00000431547 UPF3BQ9BZI7 483 aaKnown RBP21.52■■□□□ 1.04
RFTN1-202ENST00000431547 SLC12A7Q9Y666 1083 aa21.52■■□□□ 1.04
RFTN1-202ENST00000431547 PALM3A6NDB9 673 aaPredicted RBP21.51■■□□□ 1.03
RFTN1-202ENST00000431547 PEX10O60683 326 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 ZBED4O75132 1171 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 GOLGA8HP0CJ92 632 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 CALM1P0DP23 149 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 CALM2P0DP24 149 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 CALM3P0DP25 149 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 KIF22Q14807 665 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 REPS2Q8NFH8 660 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 SLC38A10Q9HBR0 1119 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 MAD2L2Q9UI95 211 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 PRR12Q9ULL5 1215 aa21.51■■□□□ 1.03
RFTN1-202ENST00000431547 ATP2A1O14983 1001 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 SLC16A2P36021 539 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 CCNA1P78396 465 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 TMEM132BQ14DG7 1078 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 SYDE2Q5VT97 1194 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 SYNE3Q6ZMZ3 975 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 STAG2Q8N3U4 1231 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 NUP133Q8WUM0 1156 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 ALDH8A1Q9H2A2 487 aaPredicted RBP21.5■■□□□ 1.03
RFTN1-202ENST00000431547 BRPF3Q9ULD4 1205 aa21.5■■□□□ 1.03
RFTN1-202ENST00000431547 ARHGEF6Q15052 776 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 APOA5Q6Q788 366 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 CD99L2Q8TCZ2 262 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 BRF1Q92994 677 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 MYL10Q9BUA6 226 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 PDRG1Q9NUG6 133 aa21.49■■□□□ 1.03
RFTN1-202ENST00000431547 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
RFTN1-202ENST00000431547 CTDP1Q9Y5B0 961 aaPredicted RBP21.49■■□□□ 1.03
RFTN1-202ENST00000431547 KLRF2D3W0D1 207 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 KIF5BP33176 963 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 STAT3P40763 770 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 PSMC4P43686 418 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 RCAN1P53805 252 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 OAZ1P54368 228 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 EVCP57679 992 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 CTCFLQ8NI51 663 aaPredicted RBP21.48■■□□□ 1.03
RFTN1-202ENST00000431547 MOV10L1Q9BXT6 1211 aaKnown RBP21.48■■□□□ 1.03
RFTN1-202ENST00000431547 UBA5Q9GZZ9 404 aa21.48■■□□□ 1.03
RFTN1-202ENST00000431547 RANBP17Q9H2T7 1088 aaKnown RBP21.48■■□□□ 1.03
RFTN1-202ENST00000431547 RLFQ13129 1914 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 KLF18A0A0U1RQI7 1052 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 GNRH1P01148 92 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 CTGFP29279 349 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 MAPK4P31152 587 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 FCGRTP55899 365 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 CAP1Q01518 475 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 APOBRQ0VD83 1088 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 TOB2Q14106 344 aaPredicted RBP21.47■■□□□ 1.03
RFTN1-202ENST00000431547 FANCBQ8NB91 859 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 SHCBP1Q8NEM2 672 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 TRIM47Q96LD4 638 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 KIF2CQ99661 725 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 TEX13BQ9BXU2 312 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 ARHGAP39Q9C0H5 1083 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 PORCNQ9H237 461 aa21.47■■□□□ 1.03
RFTN1-202ENST00000431547 ZBTB43O43298 467 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 FMNL1O95466 1100 aaPredicted RBP21.46■■□□□ 1.03
RFTN1-202ENST00000431547 SLC25A27O95847 323 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 GNAQP50148 359 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 PLS1Q14651 629 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 RIOX2Q8IUF8 465 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
RFTN1-202ENST00000431547 ADGRF4Q8IZF3 695 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 LZTS2Q9BRK4 669 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 CPVLQ9H3G5 476 aa21.46■■□□□ 1.03
RFTN1-202ENST00000431547 RXRAP19793 462 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 COPB2P35606 906 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 MICU3Q86XE3 530 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 CPXCR1Q8N123 301 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 TBC1D32Q96NH3 1257 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 MROH8Q9H579 483 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 RIOX1Q9H6W3 641 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 JMJD4Q9H9V9 463 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 EFCC1Q9HA90 598 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 RAVER2Q9HCJ3 691 aaKnown RBP21.45■■□□□ 1.02
RFTN1-202ENST00000431547 ZNF536O15090 1300 aa21.45■■□□□ 1.02
RFTN1-202ENST00000431547 A0A0G2JMZ2 1700 aa21.44■■□□□ 1.02
RFTN1-202ENST00000431547 TNPO2O14787 897 aaKnown RBP21.44■■□□□ 1.02
RFTN1-202ENST00000431547 NEK4P51957 841 aa21.44■■□□□ 1.02
RFTN1-202ENST00000431547 SNAP25P60880 206 aa21.44■■□□□ 1.02
RFTN1-202ENST00000431547 PPP2R5BQ15173 497 aa21.44■■□□□ 1.02
RFTN1-202ENST00000431547 SNRNP48Q6IEG0 339 aaKnown RBP21.44■■□□□ 1.02
RFTN1-202ENST00000431547 RAB11FIP4Q86YS3 637 aa21.44■■□□□ 1.02
RFTN1-202ENST00000431547 PNMA2Q9UL42 364 aa21.44■■□□□ 1.02
RFTN1-202ENST00000431547 ICAM1P05362 532 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 ERCC3P19447 782 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 HOXD10P28358 340 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms