RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 LRRC41Q15345 812 aa19.24■□□□□ 0.67
AC055876.3-201ENST00000431496 FAM47AQ5JRC9 791 aa19.24■□□□□ 0.67
AC055876.3-201ENST00000431496 SLC39A5Q6ZMH5 540 aa19.24■□□□□ 0.67
AC055876.3-201ENST00000431496 GMCL1P1Q8NEA9 526 aa19.24■□□□□ 0.67
AC055876.3-201ENST00000431496 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 TAL1P17542 331 aaPredicted RBP19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 ADCYAP1R1P41586 468 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 RTP1P59025 263 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 SLFN13Q68D06 897 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 GPR153Q6NV75 609 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 CPXCR1Q8N123 301 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 KIFC2Q96AC6 838 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 DDX11Q96FC9 970 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 SLC38A10Q9HBR0 1119 aa19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 CTDP1Q9Y5B0 961 aaPredicted RBP19.23■□□□□ 0.67
AC055876.3-201ENST00000431496 PLIN4Q96Q06 1357 aa19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 FOXP2O15409 715 aa19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 RARBP10826 455 aa19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 CCDC129Q6ZRS4 1044 aa19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 MSL3Q8N5Y2 521 aaKnown RBP19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 EVI5LQ96CN4 794 aa19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 LBHD1Q9BQE6 289 aaPredicted RBP19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 RAVER2Q9HCJ3 691 aaKnown RBP19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 ATP11BQ9Y2G3 1177 aa19.22■□□□□ 0.67
AC055876.3-201ENST00000431496 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 DNAJC25-GNG10A0A024R161 153 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 BMP3P12645 472 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 SLC4A3P48751 1232 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 PDE1AP54750 535 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 SNX17Q15036 470 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 FERMT2Q96AC1 680 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 XPNPEP3Q9NQH7 507 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 INCENPQ9NQS7 918 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 CNPY2Q9Y2B0 182 aa19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
AC055876.3-201ENST00000431496 OAZ1P54368 228 aa19.2■□□□□ 0.66
AC055876.3-201ENST00000431496 C1orf53Q5VUE5 145 aa19.2■□□□□ 0.66
AC055876.3-201ENST00000431496 MAMDC4Q6UXC1 1216 aa19.2■□□□□ 0.66
AC055876.3-201ENST00000431496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.66
AC055876.3-201ENST00000431496 PHF24Q9UPV7 400 aa19.2■□□□□ 0.66
AC055876.3-201ENST00000431496 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
AC055876.3-201ENST00000431496 TMEM232C9JQI7 657 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 SNAI1O95863 264 aaPredicted RBP19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 PGK1P00558 417 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 FDX1P10109 184 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 AKR1A1P14550 325 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 CTDSPL2Q05D32 466 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 ALX1Q15699 326 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 PPP4R3BQ5MIZ7 849 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 VPS53Q5VIR6 699 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 RNF180Q86T96 592 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 CHST13Q8NET6 341 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 CHURC1Q8WUH1 139 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 GMCL1Q96IK5 515 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 IL17RBQ9NRM6 502 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 HELLSQ9NRZ9 838 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 FBXO40Q9UH90 709 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 SYNGAP1Q96PV0 1343 aa19.19■□□□□ 0.66
AC055876.3-201ENST00000431496 MCCP23508 829 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 TRIM60Q495X7 471 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 TICAM2Q86XR7 235 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 ANKRD35Q8N283 1001 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 STAG1Q8WVM7 1258 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 FAM184BQ9ULE4 1060 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 TACC3Q9Y6A5 838 aa19.18■□□□□ 0.66
AC055876.3-201ENST00000431496 TSPY2A6NKD2 308 aa19.17■□□□□ 0.66
AC055876.3-201ENST00000431496 SLC1A4P43007 532 aa19.17■□□□□ 0.66
AC055876.3-201ENST00000431496 STAT2P52630 851 aa19.17■□□□□ 0.66
AC055876.3-201ENST00000431496 AAMPQ13685 434 aa19.17■□□□□ 0.66
AC055876.3-201ENST00000431496 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
AC055876.3-201ENST00000431496 STX8Q9UNK0 236 aa19.17■□□□□ 0.66
AC055876.3-201ENST00000431496 ORC4O43929 436 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 RANBP6O60518 1105 aaKnown RBP19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 NMT2O60551 498 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 PLA2G6O60733 806 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 ADAMTS4O75173 837 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 FGRP09769 529 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 TLE2Q04725 743 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 RCSD1Q6JBY9 416 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 DEFB123Q8N688 67 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 LENG1Q96BZ8 264 aaPredicted RBP19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 FAM227BQ96M60 508 aa19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 ISY1Q9ULR0 285 aaKnown RBP19.16■□□□□ 0.66
AC055876.3-201ENST00000431496 FGAP02671 866 aa19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 NOVP48745 357 aa19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 ACVR2BQ13705 512 aa19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 FGD4Q96M96 766 aa19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 AGBL1Q96MI9 1066 aa19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 TSEN34Q9BSV6 310 aaKnown RBP19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 PRDM5Q9NQX1 630 aaPredicted RBP19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 PDLIM7Q9NR12 457 aa19.15■□□□□ 0.66
AC055876.3-201ENST00000431496 HOMER2Q9NSB8 354 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms