RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 NDUFB10O96000 172 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 SCG2P13521 617 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 SLC1A4P43007 532 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 GUCY1B3Q02153 619 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 RESTQ13127 1097 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 CCDC96Q2M329 555 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 SLC35G1Q2M3R5 365 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 NOL9Q5SY16 702 aaKnown RBP21.06■□□□□ 0.96
HMGN1-206ENST00000431390 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 FERMT3Q86UX7 667 aa21.05■□□□□ 0.96
HMGN1-206ENST00000431390 FAM177A1Q8N128 213 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-206ENST00000431390 VCPKMTQ9H867 229 aa21.05■□□□□ 0.96
HMGN1-206ENST00000431390 TCHHQ07283 1943 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 PPP1R12BO60237 982 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-206ENST00000431390 MCM4P33991 863 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 NF2P35240 595 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 FKBP1BP68106 108 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 OTUD7BQ6GQQ9 843 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 REM2Q8IYK8 340 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-206ENST00000431390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.04■□□□□ 0.96
HMGN1-206ENST00000431390 RRP36Q96EU6 259 aaKnown RBP21.04■□□□□ 0.96
HMGN1-206ENST00000431390 GPCPD1Q9NPB8 672 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 SH3GLB2Q9NR46 395 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 GJB4Q9NTQ9 266 aa21.04■□□□□ 0.96
HMGN1-206ENST00000431390 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-206ENST00000431390 PHIPQ8WWQ0 1821 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 hCG_1642624A0A1W2PR95 340 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 RAD21O60216 631 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 USP2O75604 605 aaPredicted RBP21.03■□□□□ 0.96
HMGN1-206ENST00000431390 MMP1P03956 469 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 MCTP1Q6DN14 999 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 KCTD1Q719H9 257 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 PICK1Q9NRD5 415 aa21.03■□□□□ 0.96
HMGN1-206ENST00000431390 OTOFQ9HC10 1997 aa21.02■□□□□ 0.96
HMGN1-206ENST00000431390 BMP3P12645 472 aa21.02■□□□□ 0.96
HMGN1-206ENST00000431390 ZKSCAN4Q969J2 545 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-206ENST00000431390 WDR18Q9BV38 432 aa21.02■□□□□ 0.96
HMGN1-206ENST00000431390 UBA5Q9GZZ9 404 aa21.02■□□□□ 0.96
HMGN1-206ENST00000431390 AS3MTQ9HBK9 375 aa21.02■□□□□ 0.96
HMGN1-206ENST00000431390 SEC63Q9UGP8 760 aaKnown RBP21.02■□□□□ 0.96
HMGN1-206ENST00000431390 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 GOLGA6L22H0YM25 854 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 SAFBQ15424 915 aaKnown RBP eCLIP21.02■□□□□ 0.95
HMGN1-206ENST00000431390 TTBK2Q6IQ55 1244 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 BRAPQ7Z569 592 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 PHF20Q9BVI0 1012 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 KIAA1683Q9H0B3 1180 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 CPVLQ9H3G5 476 aa21.02■□□□□ 0.95
HMGN1-206ENST00000431390 hCG_1984214I3L0E3 225 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 PTPRAP18433 802 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 IREB2P48200 963 aaKnown RBP21.01■□□□□ 0.95
HMGN1-206ENST00000431390 BTNL9Q6UXG8 535 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 CCDC84Q86UT8 332 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-206ENST00000431390 ADGRF4Q8IZF3 695 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 ZNF713Q8N859 430 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-206ENST00000431390 FEZ1Q99689 392 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 VPS54Q9P1Q0 977 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 FZD1Q9UP38 647 aa21.01■□□□□ 0.95
HMGN1-206ENST00000431390 TBC1D8O95759 1140 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 PTMSP20962 102 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 U2AF2P26368 475 aaKnown RBP eCLIP21■□□□□ 0.958e-8■■■■■ 35
HMGN1-206ENST00000431390 USP14P54578 494 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 MAP3K9P80192 1104 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 PIBF1Q8WXW3 757 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 LPAR1Q92633 364 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 MTMR8Q96EF0 704 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 PIGSQ96S52 555 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 JMJD4Q9H9V9 463 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 PCDH10Q9P2E7 1040 aa21■□□□□ 0.95
HMGN1-206ENST00000431390 USP17L10C9JJH3 530 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 PLA2G6O60733 806 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 MAP3K11Q16584 847 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 KIAA1755Q5JYT7 1200 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 CCDC148Q8NFR7 591 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 SHISA4Q96DD7 197 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 FOXP1Q9H334 677 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-206ENST00000431390 VAT1LQ9HCJ6 419 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 BARHL2Q9NY43 387 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 ISY1Q9ULR0 285 aaKnown RBP20.99■□□□□ 0.95
HMGN1-206ENST00000431390 KCNJ14Q9UNX9 436 aa20.99■□□□□ 0.95
HMGN1-206ENST00000431390 PNMA6FA0A0J9YX94 578 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 KRT85P78386 507 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 DNM1Q05193 864 aaKnown RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 PRKG1Q13976 671 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 TTLL12Q14166 644 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 FOXD4L6Q3SYB3 417 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 WWC2Q6AWC2 1192 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 ATL3Q6DD88 541 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 FOXD4L3Q6VB84 417 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 HOMER1Q86YM7 354 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 DIS3L2Q8IYB7 885 aaKnown RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 SPICE1Q8N0Z3 855 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 ZNF280CQ8ND82 737 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 CCDC12Q8WUD4 166 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 ZNF296Q8WUU4 475 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 NUP88Q99567 741 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-206ENST00000431390 BRMS1Q9HCU9 246 aa20.98■□□□□ 0.95
HMGN1-206ENST00000431390 KIF28PB7ZC32 967 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 TMEM232C9JQI7 657 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms