RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 PRPF38AQ8NAV1 312 aaKnown RBP17.99■□□□□ 0.47
TOP3B-204ENST00000430142 DDX11Q96FC9 970 aa17.99■□□□□ 0.47
TOP3B-204ENST00000430142 CDX2Q99626 313 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-204ENST00000430142 TEX13BQ9BXU2 312 aa17.99■□□□□ 0.47
TOP3B-204ENST00000430142 SEMA6BQ9H3T3 888 aa17.99■□□□□ 0.47
TOP3B-204ENST00000430142 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
TOP3B-204ENST00000430142 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
TOP3B-204ENST00000430142 PQBP1O60828 265 aaKnown RBP17.98■□□□□ 0.47
TOP3B-204ENST00000430142 ADAMTS4O75173 837 aa17.98■□□□□ 0.47
TOP3B-204ENST00000430142 SNAI1O95863 264 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-204ENST00000430142 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
TOP3B-204ENST00000430142 CPXCR1Q8N123 301 aa17.98■□□□□ 0.47
TOP3B-204ENST00000430142 APPBP2Q92624 585 aa17.98■□□□□ 0.47
TOP3B-204ENST00000430142 CUL9Q8IWT3 2517 aa17.98■□□□□ 0.47
TOP3B-204ENST00000430142 PLXNA1Q9UIW2 1896 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 ROBO3Q96MS0 1386 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 DNAJC25-GNG10A0A024R161 153 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 ZBED4O75132 1171 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 PRDM1O75626 825 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 EPHB4P54760 987 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 SMAD3P84022 425 aaKnown RBP17.97■□□□□ 0.47
TOP3B-204ENST00000430142 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
TOP3B-204ENST00000430142 COL25A1Q9BXS0 654 aaPredicted RBP17.97■□□□□ 0.47
TOP3B-204ENST00000430142 EPB41L4AQ9HCS5 686 aaPredicted RBP17.97■□□□□ 0.47
TOP3B-204ENST00000430142 FAM184BQ9ULE4 1060 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
TOP3B-204ENST00000430142 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
TOP3B-204ENST00000430142 M0R2C6 588 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 GPAA1O43292 621 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 APPP05067 770 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 RAG1P15918 1043 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 TDO2P48775 406 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 ACLYP53396 1101 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-204ENST00000430142 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 MKL1Q969V6 931 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 KIFC2Q96AC6 838 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
TOP3B-204ENST00000430142 TTYH1Q9H313 450 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-204ENST00000430142 DCTPP1Q9H773 170 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 RAVER2Q9HCJ3 691 aaKnown RBP17.96■□□□□ 0.47
TOP3B-204ENST00000430142 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
TOP3B-204ENST00000430142 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-204ENST00000430142 CTDP1Q9Y5B0 961 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-204ENST00000430142 SYNGAP1Q96PV0 1343 aa17.96■□□□□ 0.46
TOP3B-204ENST00000430142 SYNRGQ9UMZ2 1314 aa17.96■□□□□ 0.46
TOP3B-204ENST00000430142 ATP2A1O14983 1001 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 FAAP100Q0VG06 881 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 KCNA10Q16322 511 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 STARD7Q9NQZ5 370 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
TOP3B-204ENST00000430142 MYADML2A6NDP7 307 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 PATL2C9JE40 543 aaKnown RBP17.94■□□□□ 0.46
TOP3B-204ENST00000430142 ZFYP08048 801 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-204ENST00000430142 GNAT2P19087 354 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 IRX5P78411 483 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-204ENST00000430142 CCSAPQ6IQ19 270 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-204ENST00000430142 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 IFNL3Q8IZI9 196 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
TOP3B-204ENST00000430142 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 FEM1BQ9UK73 627 aa17.94■□□□□ 0.46
TOP3B-204ENST00000430142 DCDC2CA8MYV0 355 aa17.93■□□□□ 0.46
TOP3B-204ENST00000430142 DUSP11O75319 330 aaKnown RBP17.93■□□□□ 0.46
TOP3B-204ENST00000430142 FPGSQ05932 587 aa17.93■□□□□ 0.46
TOP3B-204ENST00000430142 ACVR2BQ13705 512 aa17.93■□□□□ 0.46
TOP3B-204ENST00000430142 ZNF467Q7Z7K2 595 aaPredicted RBP17.93■□□□□ 0.46
TOP3B-204ENST00000430142 LRRC47Q8N1G4 583 aaKnown RBP17.93■□□□□ 0.46
TOP3B-204ENST00000430142 MYLIPQ8WY64 445 aa17.93■□□□□ 0.46
TOP3B-204ENST00000430142 FGD4Q96M96 766 aa17.93■□□□□ 0.46
TOP3B-204ENST00000430142 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
TOP3B-204ENST00000430142 ZNF287Q9HBT7 754 aa17.93■□□□□ 0.46
TOP3B-204ENST00000430142 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.93■□□□□ 0.46
TOP3B-204ENST00000430142 MOXD2PA6NHM9 499 aa17.92■□□□□ 0.46
TOP3B-204ENST00000430142 ADCY6O43306 1168 aa17.92■□□□□ 0.46
TOP3B-204ENST00000430142 TTLL1O95922 423 aa17.92■□□□□ 0.46
TOP3B-204ENST00000430142 SLFN13Q68D06 897 aa17.92■□□□□ 0.46
TOP3B-204ENST00000430142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.46
TOP3B-204ENST00000430142 GMCL1P1Q8NEA9 526 aa17.92■□□□□ 0.46
TOP3B-204ENST00000430142 MAFAQ8NHW3 353 aaPredicted RBP17.92■□□□□ 0.46
TOP3B-204ENST00000430142 C6orf222P0C671 652 aaPredicted RBP17.91■□□□□ 0.46
TOP3B-204ENST00000430142 BMP3P12645 472 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 CCDC144BQ3MJ40 725 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 CHST13Q8NET6 341 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 NEDD1Q8NHV4 660 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 ABHD16BQ9H3Z7 469 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 HOMER2Q9NSB8 354 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 FBXO40Q9UH90 709 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 SYNPO2Q9UMS6 1093 aa17.91■□□□□ 0.46
TOP3B-204ENST00000430142 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
TOP3B-204ENST00000430142 TIMP1P01033 207 aa17.9■□□□□ 0.46
TOP3B-204ENST00000430142 ASGR1P07306 291 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms