RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 IKBKBO14920 756 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 DESP17661 470 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 PUM3Q15397 648 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 MAATS1Q7Z4T9 603 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 TRIM42Q8IWZ5 723 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 PPANQ9NQ55 473 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.163e-27■■■■■ 503.1
SYNGAP1-203ENST00000428982 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 ZBTB43O43298 467 aa16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 PYGLP06737 847 aa16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 KIAA0825Q8IV33 1275 aa16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 MFN1Q8IWA4 741 aa16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 EZH1Q92800 747 aaPredicted RBP16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.16
SYNGAP1-203ENST00000428982 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 VCPKMTQ9H867 229 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 PPFIA3O75145 1194 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 BMP15O95972 392 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 HAND2P61296 217 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 PLCB4Q15147 1175 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 SEPT14Q6ZU15 432 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 SPATA21Q7Z572 469 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 ANKS4BQ8N8V4 417 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 TMEM87BQ96K49 555 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 PNKPQ96T60 521 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 TSGA10Q9BZW7 698 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 CNNM2Q9H8M5 875 aa16.02■□□□□ 0.15
SYNGAP1-203ENST00000428982 STX10O60499 249 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 PTPN12Q05209 780 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 SDCCAG8Q86SQ7 713 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 RASSF8Q8NHQ8 419 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 RNF41Q9H4P4 317 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 FERP16591 822 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 DRP2Q13474 957 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 CEP128Q6ZU80 1094 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 TAX1BP1Q86VP1 789 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 TMTC2Q8N394 836 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 DRAXINQ8NBI3 349 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 TATDN2Q93075 761 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 VCXQ9H320 206 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 CIAO1O76071 339 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 GNAT1P11488 350 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 CFAP58Q5T655 872 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 XAGE2Q96GT9 111 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 HAUS2Q9NVX0 235 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
SYNGAP1-203ENST00000428982 MAFGO15525 162 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 DZIP1Q86YF9 867 aaKnown RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 DTNBP1Q96EV8 351 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 FAM167BQ9BTA0 163 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 GREM2Q9H772 168 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 LRRIQ3A6PVS8 624 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 ADKP55263 362 aaKnown RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 DYNC1I2Q13409 638 aaKnown RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 CACNA2D3Q8IZS8 1091 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 CCDC24Q8N4L8 307 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 CCHCR1Q8TD31 782 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 NAPBQ9H115 298 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 HPDP32754 393 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 ALS2CR12Q96Q35 445 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 CTAGE1Q96RT6 745 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 KRT23Q9C075 422 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 RPS6KL1Q9Y6S9 549 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
SYNGAP1-203ENST00000428982 FAM81AQ8TBF8 368 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 BICD1Q96G01 975 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 NARFQ9UHQ1 456 aa16■□□□□ 0.15
SYNGAP1-203ENST00000428982 BCL9O00512 1426 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 VWA3AA6NCI4 1184 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 KCTD16Q68DU8 428 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 LPIN2Q92539 896 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 TRPM3Q9HCF6 1732 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 AHCYL1O43865 530 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 INF2Q27J81 1249 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 SLC27A3Q5K4L6 730 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 CCDC63Q8NA47 563 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 LINC00301Q8NCQ3 95 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 COG1Q8WTW3 980 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 MATR3P43243 847 aaKnown RBP eCLIP15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 LACTBP83111 547 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms