RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 DEPTORQ8TB45 409 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 PARK7Q99497 189 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 VAMP4O75379 141 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 NPM3O75607 178 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 TNNT1P13805 278 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 ADCY7P51828 1080 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 GPSM2P81274 684 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 PDIA6Q15084 440 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SPA17Q15506 151 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 EXOC8Q8IYI6 725 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 OTUD6BQ8N6M0 293 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 LZTS2Q9BRK4 669 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 KANSL2Q9H9L4 492 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 FBXO40Q9UH90 709 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 TTC41PQ6P2S7 1318 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 GAS7O60861 476 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 GNAT1P11488 350 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 ZAP70P43403 619 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 MAEAQ7L5Y9 396 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 FOXP4Q8IVH2 680 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 ANKRD44Q8N8A2 993 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SUCLG2Q96I99 432 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 IPO9Q96P70 1041 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 JPH2Q9BR39 696 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SCAND2PQ9GZW5 306 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 TDRD3Q9H7E2 651 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 EXOC7Q9UPT5 735 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 RBM8AQ9Y5S9 174 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 ZNF532Q9HCE3 1301 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SLC34A2O95436 690 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 MYL3P08590 195 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 CCDC192P0DO97 292 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SCARF1Q14162 830 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SKIDA1Q1XH10 827 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 SEPT14Q6ZU15 432 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 G2E3Q7L622 706 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 ELP3Q9H9T3 547 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 GGA3Q9NZ52 723 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 PCDHA1Q9Y5I3 950 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 SMTNL1A8MU46 457 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 B4E1Z4 1266 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 IL1R1P14778 569 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 SNAPC2Q13487 334 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 KIAA1328Q86T90 577 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 RASAL3Q86YV0 1011 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 FAM114A1Q8IWE2 563 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 MRPL50Q8N5N7 158 aaKnown RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 TCEANC2Q96MN5 208 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 GCNAQ96QF7 691 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 SWAP70Q9UH65 585 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 GSTTP1A0A1W2PQM5 241 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 PDE8BO95263 885 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 KRT19P08727 400 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 KIF23Q02241 960 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 SPP2Q13103 211 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 WDR44Q5JSH3 913 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 CCDC102BQ68D86 513 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 CIAO1O76071 339 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 CSF1RP07333 972 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 CCT6AP40227 531 aaKnown RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 ARL1P40616 181 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 SNX16P57768 344 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 RIOK1Q9BRS2 568 aaKnown RBP8.13□□□□□ -1.11
CNOT4-206ENST00000428680 AKT3Q9Y243 479 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 NDUFB9Q9Y6M9 179 aa8.13□□□□□ -1.11
CNOT4-206ENST00000428680 STX10O60499 249 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 COPB2P35606 906 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 NT5C2P49902 561 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 NMIQ13287 307 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-206ENST00000428680 NCAPH2Q6IBW4 605 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 SLC17A8Q8NDX2 589 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 LARP6Q9BRS8 491 aaKnown RBP8.12□□□□□ -1.11
CNOT4-206ENST00000428680 APOL6Q9BWW8 343 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 MCOLN1Q9GZU1 580 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 CCDC171Q6TFL3 1326 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 CCL15-CCL14A0A0B4J2E2 113 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 USP17L5A8MUK1 530 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 XPOTO43592 962 aaKnown RBP8.12□□□□□ -1.11
CNOT4-206ENST00000428680 GBP2P32456 591 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-206ENST00000428680 KRT2P35908 639 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 CCL15Q16663 113 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 RRAGBQ5VZM2 374 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 HHIPL2Q6UWX4 724 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 MIER3Q7Z3K6 550 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 CDHR1Q96JP9 859 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 NOX5Q96PH1 765 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 MYH3P11055 1940 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 AKAP11Q9UKA4 1901 aa8.12□□□□□ -1.11
CNOT4-206ENST00000428680 DPYSL4O14531 572 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms