RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 LTBP2Q14767 1821 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 LAMA2P24043 3122 aaKnown RBP18.49■□□□□ 0.55
SEC13-210ENST00000428626 DNAJC25-GNG10A0A024R161 153 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 ATP2A1O14983 1001 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 TTLL1O95922 423 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 MYCNP04198 464 aaPredicted RBP18.49■□□□□ 0.55
SEC13-210ENST00000428626 ADCYAP1R1P41586 468 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 TFAP4Q01664 338 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 SNX17Q15036 470 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 CPXCR1Q8N123 301 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 KIFC2Q96AC6 838 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 FGD4Q96M96 766 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 NAPBQ9H115 298 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
SEC13-210ENST00000428626 ATP11BQ9Y2G3 1177 aa18.49■□□□□ 0.55
SEC13-210ENST00000428626 MCM3APO60318 1980 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 KBTBD13C9JR72 458 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 PGK1P00558 417 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 CTDSPL2Q05D32 466 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 LRRFIP1Q32MZ4 808 aaKnown RBP18.48■□□□□ 0.55
SEC13-210ENST00000428626 Q7L0L9 218 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 RASGRP2Q7LDG7 609 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 GMCL1P1Q8NEA9 526 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 CHMP4CQ96CF2 233 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 NACAP1Q9BZK3 213 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
SEC13-210ENST00000428626 NMT2O60551 498 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 SNAI1O95863 264 aaPredicted RBP18.47■□□□□ 0.55
SEC13-210ENST00000428626 TSPY3P0CV98 308 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 TSPY8P0CW00 308 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 COPB2P35606 906 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 PDE1AP54750 535 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 TRIM60Q495X7 471 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 ZNF287Q9HBT7 754 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 XPNPEP3Q9NQH7 507 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 IL17RBQ9NRM6 502 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 NRBP1Q9UHY1 535 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 FEM1BQ9UK73 627 aa18.47■□□□□ 0.55
SEC13-210ENST00000428626 PDE4BQ07343 736 aa18.46■□□□□ 0.55
SEC13-210ENST00000428626 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
SEC13-210ENST00000428626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.46■□□□□ 0.55
SEC13-210ENST00000428626 SH3RF1Q7Z6J0 888 aa18.46■□□□□ 0.55
SEC13-210ENST00000428626 FAM227BQ96M60 508 aa18.46■□□□□ 0.55
SEC13-210ENST00000428626 SYNPO2Q9UMS6 1093 aa18.46■□□□□ 0.55
SEC13-210ENST00000428626 PHF24Q9UPV7 400 aa18.46■□□□□ 0.55
SEC13-210ENST00000428626 TMEM232C9JQI7 657 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 ADCY6O43306 1168 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 ZBED4O75132 1171 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 RARBP10826 455 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 BMP3P12645 472 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 IRX5P78411 483 aaPredicted RBP18.45■□□□□ 0.54
SEC13-210ENST00000428626 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 ZNF536O15090 1300 aa18.45■□□□□ 0.54
SEC13-210ENST00000428626 A0A0D9SFI3 127 aa18.44■□□□□ 0.54
SEC13-210ENST00000428626 TRIM43BA6NCK2 446 aa18.44■□□□□ 0.54
SEC13-210ENST00000428626 GPR153Q6NV75 609 aa18.44■□□□□ 0.54
SEC13-210ENST00000428626 TRIM43Q96BQ3 446 aaPredicted RBP18.44■□□□□ 0.54
SEC13-210ENST00000428626 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
SEC13-210ENST00000428626 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
SEC13-210ENST00000428626 PDLIM7Q9NR12 457 aa18.44■□□□□ 0.54
SEC13-210ENST00000428626 MYADML2A6NDP7 307 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 AKR1A1P14550 325 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 MCCP23508 829 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 ITGB8P26012 769 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 SNAP25P60880 206 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 C1orf53Q5VUE5 145 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 DEFB123Q8N688 67 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 GMCL1Q96IK5 515 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 AGBL1Q96MI9 1066 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 HOMER2Q9NSB8 354 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 CNPY2Q9Y2B0 182 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 SYNRGQ9UMZ2 1314 aa18.43■□□□□ 0.54
SEC13-210ENST00000428626 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 FGRP09769 529 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 NOVP48745 357 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 OAZ1P54368 228 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 CNTN2Q02246 1040 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 TLE2Q04725 743 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 CCSAPQ6IQ19 270 aaPredicted RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 ZNF589Q86UQ0 364 aaPredicted RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 MSL3Q8N5Y2 521 aaKnown RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 LBHD1Q9BQE6 289 aaPredicted RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 PRDM5Q9NQX1 630 aaPredicted RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
SEC13-210ENST00000428626 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
SEC13-210ENST00000428626 A0A1W2PQ45 241 aaPredicted RBP18.41■□□□□ 0.54
SEC13-210ENST00000428626 A0A1W2PQY0 241 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 SLC1A4P43007 532 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 STAT2P52630 851 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 ALX1Q15699 326 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 C9orf50Q5SZB4 431 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 ZNF467Q7Z7K2 595 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms