RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 PKP1Q13835 747 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 PFKFB3Q16875 520 aaPredicted RBP14.47□□□□□ -0.09
TRIM39-207ENST00000428404 SYDE2Q5VT97 1194 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 FAM160B2Q86V87 743 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 RRP36Q96EU6 259 aaKnown RBP14.47□□□□□ -0.09
TRIM39-207ENST00000428404 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 PIGSQ96S52 555 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 MTMR6Q9Y217 621 aa14.47□□□□□ -0.09
TRIM39-207ENST00000428404 PNMA6FA0A0J9YX94 578 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 STX6O43752 255 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 BRD1O95696 1058 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 SCG2P13521 617 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 NUCB2P80303 420 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 SAPCD2Q86UD0 394 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 SHISA4Q96DD7 197 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 WNK4Q96J92 1243 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 RPAP3Q9H6T3 665 aaPredicted RBP14.46□□□□□ -0.09
TRIM39-207ENST00000428404 VAT1LQ9HCJ6 419 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 FBXO28Q9NVF7 368 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 TMOD4Q9NZQ9 345 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 PRR12Q9ULL5 1215 aa14.46□□□□□ -0.09
TRIM39-207ENST00000428404 TRPM7Q96QT4 1865 aa14.46□□□□□ -0.1
TRIM39-207ENST00000428404 ZBTB5O15062 677 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 HUNKP57058 714 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 SPRYD7Q5W111 196 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 CATSPERGQ6ZRH7 1159 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 FAM177A1Q8N128 213 aaPredicted RBP14.45□□□□□ -0.1
TRIM39-207ENST00000428404 PRPF38AQ8NAV1 312 aaKnown RBP14.45□□□□□ -0.1
TRIM39-207ENST00000428404 PROCA1Q8NCQ7 364 aaPredicted RBP14.45□□□□□ -0.1
TRIM39-207ENST00000428404 MS4A4AQ96JQ5 239 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 C8orf76Q96K31 380 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 GJB4Q9NTQ9 266 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 TLL2Q9Y6L7 1015 aa14.45□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 PPP1R11O60927 126 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-207ENST00000428404 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-207ENST00000428404 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 KRT40Q6A162 431 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 WWC2Q6AWC2 1192 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 SLF1Q9BQI6 1058 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 RANBP17Q9H2T7 1088 aaKnown RBP14.44□□□□□ -0.1
TRIM39-207ENST00000428404 BARHL2Q9NY43 387 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-207ENST00000428404 PPP1R9AQ9ULJ8 1098 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
TRIM39-207ENST00000428404 ADAMTS5Q9UNA0 930 aa14.44□□□□□ -0.1
TRIM39-207ENST00000428404 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
TRIM39-207ENST00000428404 STXBP3O00186 592 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 ZSCAN22P10073 491 aaPredicted RBP14.43□□□□□ -0.1
TRIM39-207ENST00000428404 ZBTB48P10074 688 aaPredicted RBP14.43□□□□□ -0.1
TRIM39-207ENST00000428404 CDC37Q16543 378 aaPredicted RBP14.43□□□□□ -0.1
TRIM39-207ENST00000428404 QRICH1Q2TAL8 776 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 TREML2Q5T2D2 321 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 GPAT2Q6NUI2 795 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 TYW1BQ6NUM6 668 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 FASTKD5Q7L8L6 764 aaKnown RBP14.43□□□□□ -0.1
TRIM39-207ENST00000428404 HOMER1Q86YM7 354 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 HHIPL1Q96JK4 782 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 TANGO6Q9C0B7 1094 aa14.43□□□□□ -0.1
TRIM39-207ENST00000428404 SEC63Q9UGP8 760 aaKnown RBP14.43□□□□□ -0.1
TRIM39-207ENST00000428404 MYPNQ86TC9 1320 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 TMEM88BA6NKF7 163 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 hCG_1984214I3L0E3 225 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 FLOT1O75955 427 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 FDX1P10109 184 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 DSG3P32926 999 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 GTF2A2P52657 109 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 IKQ13123 557 aaPredicted RBP14.42□□□□□ -0.1
TRIM39-207ENST00000428404 COG2Q14746 738 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 NPY5RQ15761 445 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 ZNF713Q8N859 430 aaPredicted RBP14.42□□□□□ -0.1
TRIM39-207ENST00000428404 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 PHF20Q9BVI0 1012 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 SLC38A10Q9HBR0 1119 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 VPS54Q9P1Q0 977 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 AGTPBP1Q9UPW5 1226 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 PTPRFP10586 1907 aa14.42□□□□□ -0.1
TRIM39-207ENST00000428404 TESPA1A2RU30 521 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-207ENST00000428404 VPS37CA5D8V6 355 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-207ENST00000428404 H3BQV1 296 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 VWA5AO00534 786 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 MMP1P03956 469 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 CETPP11597 493 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 XBP1P17861 261 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 FOSBP53539 338 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 SNAP25P60880 206 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 GUCY1B3Q02153 619 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 TRIM29Q14134 588 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms