RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 RARBP10826 455 aa18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 MFAP1P55081 439 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 LRRC26Q2I0M4 334 aa18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 ISY1Q9ULR0 285 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-202ENST00000428361 RANBP2P49792 3224 aaKnown RBP18.33■□□□□ 0.53
CTDSP1-202ENST00000428361 SYN1P17600 705 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 STAT2P52630 851 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 ZNF792Q3KQV3 632 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 RNF180Q86T96 592 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 LRRC47Q8N1G4 583 aaKnown RBP18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 GMCL1Q96IK5 515 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 SLC38A10Q9HBR0 1119 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 ANAPC4Q9UJX5 808 aa18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 ZNFX1Q9P2E3 1918 aaKnown RBP18.33■□□□□ 0.52
CTDSP1-202ENST00000428361 SYNGAP1Q96PV0 1343 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 PGK2P07205 417 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 AKR1A1P14550 325 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 SLC1A4P43007 532 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 MAGEA10P43363 369 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 IKQ13123 557 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 ALX1Q15699 326 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 FAM47AQ5JRC9 791 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 ZNF467Q7Z7K2 595 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 TDHQ8IZJ6 230 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 CPXCR1Q8N123 301 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 UBE2OQ9C0C9 1292 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 STX8Q9UNK0 236 aa18.32■□□□□ 0.52
CTDSP1-202ENST00000428361 ZMYM6O95789 1325 aa18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 PLA2G6O60733 806 aa18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 GJC2Q5T442 439 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 GPR153Q6NV75 609 aa18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 XPNPEP3Q9NQH7 507 aa18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTDSP1-202ENST00000428361 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 ORC4O43929 436 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 RANBP6O60518 1105 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 NT5C2P49902 561 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 TKFCQ3LXA3 575 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 LNPKQ9C0E8 428 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 PLXNA1Q9UIW2 1896 aa18.3■□□□□ 0.52
CTDSP1-202ENST00000428361 TMEM232C9JQI7 657 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 ATN1P54259 1190 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 RTP1P59025 263 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 LRRC41Q15345 812 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 LRIT3Q3SXY7 679 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 C1orf53Q5VUE5 145 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 ANO1Q5XXA6 986 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 MAMDC4Q6UXC1 1216 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 SLC39A5Q6ZMH5 540 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 ACAD9Q9H845 621 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 RAVER2Q9HCJ3 691 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 TOMM22Q9NS69 142 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 FAM184BQ9ULE4 1060 aa18.29■□□□□ 0.52
CTDSP1-202ENST00000428361 DNAJC25-GNG10A0A024R161 153 aa18.28■□□□□ 0.52
CTDSP1-202ENST00000428361 CTDSPL2Q05D32 466 aa18.28■□□□□ 0.52
CTDSP1-202ENST00000428361 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
CTDSP1-202ENST00000428361 ATP11BQ9Y2G3 1177 aa18.28■□□□□ 0.52
CTDSP1-202ENST00000428361 HIP1O00291 1037 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 FGRP09769 529 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 ZNF865P0CJ78 1059 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 SNX17Q15036 470 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 CHD1LQ86WJ1 897 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 DCAF4Q8WV16 495 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 RILPL2Q969X0 211 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 TSEN34Q9BSV6 310 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 PNMA2Q9UL42 364 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 PHF24Q9UPV7 400 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 RIPK3Q9Y572 518 aa18.27■□□□□ 0.52
CTDSP1-202ENST00000428361 CCDC171Q6TFL3 1326 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 FOXP2O15409 715 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 FGAP02671 866 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 MCCP23508 829 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 ADCYAP1R1P41586 468 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 VPS53Q5VIR6 699 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 NUP133Q8WUM0 1156 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-202ENST00000428361 A0A0D9SFI3 127 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 MOXD2PA6NHM9 499 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 POTEB2H3BUK9 544 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms