RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 CYTH3O43739 400 aa20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 TMEM179Q6ZVK1 233 aa20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 LRRC47Q8N1G4 583 aaKnown RBP20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 MKL1Q969V6 931 aa20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 FTOQ9C0B1 505 aaKnown RBP eCLIP20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 VPS54Q9P1Q0 977 aa20.69■□□□□ 0.9
AC055811.2-201ENST00000427497 USP17L5A8MUK1 530 aa20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 TBC1D12O60347 775 aa20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 MKRN3Q13064 507 aaKnown RBP20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 SHROOM1Q2M3G4 852 aaPredicted RBP20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 USP17L2Q6R6M4 530 aa20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 POLR3EQ9NVU0 708 aa20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 TMEM63CQ9P1W3 806 aa20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 MTMR7Q9Y216 660 aa20.68■□□□□ 0.9
AC055811.2-201ENST00000427497 BTBD18B2RXH4 712 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 GOLGA8HP0CJ92 632 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 RRP1BQ14684 758 aaKnown RBP20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 ABCB5Q2M3G0 1257 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 NOSTRINQ8IVI9 506 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 TMEM39BQ9GZU3 492 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.67■□□□□ 0.91e-7■■■■□ 21.1
AC055811.2-201ENST00000427497 TM4SF4P48230 202 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 NASPP49321 788 aaPredicted RBP20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 MAP3K10Q02779 954 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 GNL2Q13823 731 aaKnown RBP20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 SPRYD7Q5W111 196 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 SIAH1Q8IUQ4 282 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 SH3GLB2Q9NR46 395 aa20.67■□□□□ 0.9
AC055811.2-201ENST00000427497 UNCXA6NJT0 531 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 YEATS4O95619 227 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 EEF2P13639 858 aaKnown RBP20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 TNNI2P48788 182 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 JAG1P78504 1218 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 SEPT2Q15019 361 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 NPY5RQ15761 445 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 SLC10A4Q96EP9 437 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 TEPSINQ96N21 525 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 MCOLN1Q9GZU1 580 aa20.66■□□□□ 0.9
AC055811.2-201ENST00000427497 OTOFQ9HC10 1997 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 USP2O75604 605 aaPredicted RBP20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 GDF11O95390 407 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 IREB2P48200 963 aaKnown RBP20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 CDAN1Q8IWY9 1227 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 LINC00301Q8NCQ3 95 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 OXER1Q8TDS5 423 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 CLMNQ96JQ2 1002 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 RIOX1Q9H6W3 641 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 CLIC4Q9Y696 253 aa20.65■□□□□ 0.9
AC055811.2-201ENST00000427497 ICA1Q05084 483 aa20.64■□□□□ 0.9
AC055811.2-201ENST00000427497 ZNF543Q08ER8 600 aa20.64■□□□□ 0.9
AC055811.2-201ENST00000427497 SREBF2Q12772 1141 aa20.64■□□□□ 0.9
AC055811.2-201ENST00000427497 ZSCAN23Q3MJ62 389 aa20.64■□□□□ 0.9
AC055811.2-201ENST00000427497 ANO1Q5XXA6 986 aa20.64■□□□□ 0.9
AC055811.2-201ENST00000427497 FAM177A1Q8N128 213 aaPredicted RBP20.64■□□□□ 0.9
AC055811.2-201ENST00000427497 GH2P01242 217 aa20.64■□□□□ 0.89
AC055811.2-201ENST00000427497 KRT2P35908 639 aa20.64■□□□□ 0.89
AC055811.2-201ENST00000427497 NR5A1Q13285 461 aa20.64■□□□□ 0.89
AC055811.2-201ENST00000427497 DGKZQ13574 1117 aa20.64■□□□□ 0.89
AC055811.2-201ENST00000427497 SYAP1Q96A49 352 aaPredicted RBP20.64■□□□□ 0.89
AC055811.2-201ENST00000427497 CABP5Q9NP86 173 aa20.64■□□□□ 0.89
AC055811.2-201ENST00000427497 ZNF445P59923 1031 aa20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 ATP2B2Q01814 1243 aa20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 GPATCH4Q5T3I0 446 aaKnown RBP20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 PIBF1Q8WXW3 757 aa20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 TNFRSF25Q93038 417 aa20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 CPVLQ9H3G5 476 aa20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
AC055811.2-201ENST00000427497 GOLGA6L4A6NEF3 574 aa20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 ANKRD13AQ8IZ07 590 aa20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 KCNG4Q8TDN1 519 aa20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 WNK4Q96J92 1243 aa20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 BRMS1Q9HCU9 246 aa20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 FRMPD2Q68DX3 1309 aaPredicted RBP20.62■□□□□ 0.89
AC055811.2-201ENST00000427497 TBC1D8O95759 1140 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 TOB1P50616 345 aaPredicted RBP20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 SLC39A14Q15043 492 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 STK38Q15208 465 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 WWC2Q6AWC2 1192 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 RRP36Q96EU6 259 aaKnown RBP20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 BARHL2Q9NY43 387 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 MANSC4A6NHS7 340 aaPredicted RBP20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 STXBP3O00186 592 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 CALML3P27482 149 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 NLRP5P59047 1200 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 PTPAQ15257 358 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 SF3A1Q15459 793 aaKnown RBP20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 RILPL1Q5EBL4 403 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 DCAF4Q8WV16 495 aa20.61■□□□□ 0.89
AC055811.2-201ENST00000427497 GPKOWQ92917 476 aaPredicted RBP eCLIP20.61■□□□□ 0.892e-8■■□□□ 11.9
AC055811.2-201ENST00000427497 UBA5Q9GZZ9 404 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms