RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SMARCA1P28370 1054 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 CHRNA5P30532 468 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 INF2Q27J81 1249 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 SH3RF1Q7Z6J0 888 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 PIGSQ96S52 555 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 ZMYND12Q9H0C1 365 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 FANCLQ9NW38 375 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 SCN9AQ15858 1988 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 MYO3BQ8WXR4 1341 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 CBFA2T2O43439 604 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 SHMT1P34896 483 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 CLEC10AQ8IUN9 316 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 KIAA0825Q8IV33 1275 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 UBA5Q9GZZ9 404 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 SMCO2A6NFE2 343 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 CASP1P29466 404 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 LONP1P36776 959 aaKnown RBP15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 UBASH3AP57075 661 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 FMR1Q06787 632 aaKnown RBP eCLIP15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 NFIAQ12857 509 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 SOGA3Q5TF21 947 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 IQUBQ8NA54 791 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 ZDHHC15Q96MV8 337 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 PYM1Q9BRP8 204 aaKnown RBP15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 C6orf50Q9HD87 102 aa15.9■□□□□ 0.14
APOBEC3D-202ENST00000427494 TTLL1O95922 423 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 TXLNAP40222 546 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 FKBP1AP62942 108 aaKnown RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 DPYDQ12882 1025 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 E2F4Q16254 413 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 SLC15A2Q16348 729 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 KRT25Q7Z3Z0 450 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 MYH4Q9Y623 1939 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 GREB1LQ9C091 1923 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 MPHOSPH10O00566 681 aaKnown RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 UQCRHP07919 91 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 SKILP12757 684 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 GNA11P29992 359 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 RBM5P52756 815 aaKnown RBP eCLIP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 CCZ1BP86790 482 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 CCZ1P86791 482 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 EZH2Q15910 746 aaKnown RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 DACT2Q5SW24 774 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 TRMT44Q8IYL2 757 aaKnown RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 DPF2Q92785 391 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 RIOX1Q9H6W3 641 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
APOBEC3D-202ENST00000427494 C10orf71Q711Q0 1435 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 CACNB3P54284 484 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 NONOQ15233 471 aaKnown RBP eCLIP15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 CFAP100Q494V2 611 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 PDXDC2PQ6P474 469 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 ZFPM1Q8IX07 1006 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 CCDC150Q8NCX0 1101 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 GSDMAQ96QA5 445 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 TMEM60Q9H2L4 133 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 GPCPD1Q9NPB8 672 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 STK32BQ9NY57 414 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 NFE2L3Q9Y4A8 694 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 SIPA1L1O43166 1804 aa15.88■□□□□ 0.13
APOBEC3D-202ENST00000427494 SNHG28P0DPA3 235 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 AOC3Q16853 763 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 STAMQ92783 540 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 EHD4Q9H223 541 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 hCG_1984214I3L0E3 225 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 ERCC5P28715 1186 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 CDC25AP30304 524 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 ATP2B2Q01814 1243 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 EN1Q05925 392 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 TCP10Q12799 353 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 ZNF713Q8N859 430 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 MRIQ9BWK5 157 aa15.87■□□□□ 0.13
APOBEC3D-202ENST00000427494 ESYT2A0FGR8 921 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 LAD1O00515 517 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 SLURP2P0DP57 97 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 ZNF543Q08ER8 600 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 DHX8Q14562 1220 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 KARSQ15046 597 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 LETM2Q2VYF4 491 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 ARMCX5Q6P1M9 558 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 PRIMPOLQ96LW4 560 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 BLZF1Q9H2G9 400 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 GTPBP6O43824 516 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 ZNF18P17022 549 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 CDK11BP21127 795 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 SFPQP23246 707 aaKnown RBP eCLIP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 STAT6P42226 847 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 TPD52L1Q16890 204 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms