RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CDC27P30260 824 aa17.92■□□□□ 0.46
COL11A1-204ENST00000427239 SCRN1Q12765 414 aa17.92■□□□□ 0.46
COL11A1-204ENST00000427239 HSCBQ8IWL3 235 aa17.92■□□□□ 0.46
COL11A1-204ENST00000427239 MYPNQ86TC9 1320 aa17.92■□□□□ 0.46
COL11A1-204ENST00000427239 PCNTO95613 3336 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 K7ELQ4 463 aaPredicted RBP17.91■□□□□ 0.46
COL11A1-204ENST00000427239 PDHXO00330 501 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 LARGE1O95461 756 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 FDX1P10109 184 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
COL11A1-204ENST00000427239 TTBK2Q6IQ55 1244 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 SLF1Q9BQI6 1058 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 UBA5Q9GZZ9 404 aa17.91■□□□□ 0.46
COL11A1-204ENST00000427239 NCOA5Q9HCD5 579 aaKnown RBP17.91■□□□□ 0.46
COL11A1-204ENST00000427239 CDKL5O76039 1030 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 IFNL1Q8IU54 200 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 SPZ1Q9BXG8 430 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 ASCC2Q9H1I8 757 aaPredicted RBP17.9■□□□□ 0.46
COL11A1-204ENST00000427239 RIOX1Q9H6W3 641 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 PPP1R9AQ9ULJ8 1098 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 PTPRFP10586 1907 aa17.9■□□□□ 0.46
COL11A1-204ENST00000427239 AOC2O75106 756 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 ALDH1A1P00352 501 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 IFNAR1P17181 557 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 DSG3P32926 999 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 SLC16A2P36021 539 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 BECN1Q14457 450 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 NTRK3Q16288 839 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 SYDE2Q5VT97 1194 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 ADGRF4Q8IZF3 695 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 SRBD1Q8N5C6 995 aaKnown RBP17.89■□□□□ 0.46
COL11A1-204ENST00000427239 ZIC5Q96T25 663 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 LLPHQ9BRT6 129 aaKnown RBP17.89■□□□□ 0.46
COL11A1-204ENST00000427239 FBXO28Q9NVF7 368 aa17.89■□□□□ 0.46
COL11A1-204ENST00000427239 PLEKHA8P1O95397 391 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 LBX2Q6XYB7 198 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 CCDC82Q8N4S0 544 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 KIFC2Q96AC6 838 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 PRR12Q9ULL5 1215 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 ADAMTS5Q9UNA0 930 aa17.89■□□□□ 0.45
COL11A1-204ENST00000427239 LOC285556D6RIA3 1793 aa17.88■□□□□ 0.45
COL11A1-204ENST00000427239 IGF2BP3O00425 579 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL11A1-204ENST00000427239 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
COL11A1-204ENST00000427239 FUT2Q10981 343 aa17.88■□□□□ 0.45
COL11A1-204ENST00000427239 MB21D1Q8N884 522 aa17.88■□□□□ 0.45
COL11A1-204ENST00000427239 GTF3C2Q8WUA4 911 aaPredicted RBP17.88■□□□□ 0.45
COL11A1-204ENST00000427239 P2RX7Q99572 595 aaKnown RBP17.88■□□□□ 0.45
COL11A1-204ENST00000427239 JMJD4Q9H9V9 463 aa17.88■□□□□ 0.45
COL11A1-204ENST00000427239 RBM27Q9P2N5 1060 aaKnown RBP17.88■□□□□ 0.45
COL11A1-204ENST00000427239 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
COL11A1-204ENST00000427239 CYTH3O43739 400 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 ZBED4O75132 1171 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 HERVK_113P62684 666 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 CUL4AQ13619 759 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 CCDC83Q8IWF9 413 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 CMTR1Q8N1G2 835 aaKnown RBP17.87■□□□□ 0.45
COL11A1-204ENST00000427239 RRP36Q96EU6 259 aaKnown RBP17.87■□□□□ 0.45
COL11A1-204ENST00000427239 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
COL11A1-204ENST00000427239 CPVLQ9H3G5 476 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 VAT1LQ9HCJ6 419 aa17.87■□□□□ 0.45
COL11A1-204ENST00000427239 SPDYE16A6NNV3 312 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 VWA5AO00534 786 aa17.86■□□□□ 0.45
COL11A1-204ENST00000427239 AKAP17AQ02040 695 aaKnown RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 SMCR8Q8TEV9 937 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 MTMR8Q96EF0 704 aa17.86■□□□□ 0.45
COL11A1-204ENST00000427239 RNF26Q9BY78 433 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 PRPF3O43395 683 aaKnown RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 GCLCP48506 637 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 TRAF1Q13077 416 aa17.86■□□□□ 0.45
COL11A1-204ENST00000427239 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 INTS4Q96HW7 963 aaKnown RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 SLC38A10Q9HBR0 1119 aa17.86■□□□□ 0.45
COL11A1-204ENST00000427239 PNMA2Q9UL42 364 aa17.86■□□□□ 0.45
COL11A1-204ENST00000427239 CTDP1Q9Y5B0 961 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-204ENST00000427239 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
COL11A1-204ENST00000427239 ZBTB5O15062 677 aa17.85■□□□□ 0.45
COL11A1-204ENST00000427239 CTDNEP1O95476 244 aa17.85■□□□□ 0.45
COL11A1-204ENST00000427239 CYP2C8P10632 490 aa17.85■□□□□ 0.45
COL11A1-204ENST00000427239 SLC35G1Q2M3R5 365 aa17.85■□□□□ 0.45
COL11A1-204ENST00000427239 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
COL11A1-204ENST00000427239 ATG4CQ96DT6 458 aa17.85■□□□□ 0.45
COL11A1-204ENST00000427239 RANBP17Q9H2T7 1088 aaKnown RBP17.85■□□□□ 0.45
COL11A1-204ENST00000427239 SEC63Q9UGP8 760 aaKnown RBP17.85■□□□□ 0.45
COL11A1-204ENST00000427239 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
COL11A1-204ENST00000427239 OAZ1P54368 228 aa17.84■□□□□ 0.45
COL11A1-204ENST00000427239 ST3GAL1Q11201 340 aa17.84■□□□□ 0.45
COL11A1-204ENST00000427239 TAF1CQ15572 869 aaPredicted RBP17.84■□□□□ 0.45
COL11A1-204ENST00000427239 PHKBQ93100 1093 aa17.84■□□□□ 0.45
COL11A1-204ENST00000427239 PIGSQ96S52 555 aa17.84■□□□□ 0.45
COL11A1-204ENST00000427239 SLC26A6Q9BXS9 759 aa17.84■□□□□ 0.45
COL11A1-204ENST00000427239 ZFYVE28Q9HCC9 887 aa17.84■□□□□ 0.45
COL11A1-204ENST00000427239 RABGAP1Q9Y3P9 1069 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms