RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 TTF1Q15361 905 aaPredicted RBP10.46□□□□□ -0.73
VNN3-208ENST00000427187 TMEM240Q5SV17 173 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 REPS2Q8NFH8 660 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 GAS2L1Q99501 681 aaPredicted RBP10.46□□□□□ -0.73
VNN3-208ENST00000427187 NRBP1Q9UHY1 535 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 TBX21Q9UL17 535 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 PPP1R9AQ9ULJ8 1098 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 ADAMTS5Q9UNA0 930 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
VNN3-208ENST00000427187 TCF20Q9UGU0 1960 aaKnown RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 USP17L21D6R901 530 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 C6orf222P0C671 652 aaPredicted RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 IGFBP4P22692 258 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 CCSAPQ6IQ19 270 aaPredicted RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 MFSD5Q6N075 450 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 TMED8Q6PL24 325 aaPredicted RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 ERC1Q8IUD2 1116 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 KLHDC9Q8NEP7 349 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 RHPN1Q8TCX5 695 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 NUP133Q8WUM0 1156 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 TOX2Q96NM4 488 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 TSEN34Q9BSV6 310 aaKnown RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 THEGQ9P2T0 379 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 FAM184BQ9ULE4 1060 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 DIS3Q9Y2L1 958 aaKnown RBP10.45□□□□□ -0.74
VNN3-208ENST00000427187 CHD7Q9P2D1 2997 aa10.45□□□□□ -0.74
VNN3-208ENST00000427187 REV3LO60673 3130 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 ASGR1P07306 291 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 PTGS1P23219 599 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 CYP2C18P33260 490 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 ADD2P35612 726 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 PPIGQ13427 754 aaKnown RBP eCLIP10.44□□□□□ -0.74
VNN3-208ENST00000427187 C12orf60Q5U649 245 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 C16orf86Q6ZW13 317 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 CPXCR1Q8N123 301 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 DDX11Q96FC9 970 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 CCDC17Q96LX7 622 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 GLT1D1Q96MS3 346 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 NECAB3Q96P71 396 aaPredicted RBP10.44□□□□□ -0.74
VNN3-208ENST00000427187 ASB2Q96Q27 587 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 NKX2-4Q9H2Z4 354 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 BOLA2Q9H3K6 86 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 GOPCQ9HD26 462 aa10.44□□□□□ -0.74
VNN3-208ENST00000427187 CXXC1Q9P0U4 656 aaPredicted RBP10.44□□□□□ -0.74
VNN3-208ENST00000427187 MYH7P12883 1935 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 UMODL1Q5DID0 1318 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 DUSP11O75319 330 aaKnown RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 CDK7P50613 346 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 BEX3Q00994 111 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 CCDC144BQ3MJ40 725 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 RASIP1Q5U651 963 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 MICALL1Q8N3F8 863 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 PANK1Q8TE04 598 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 ATXN2LQ8WWM7 1075 aaKnown RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 FGD4Q96M96 766 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 UHRF1Q96T88 793 aaPredicted RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 SLF1Q9BQI6 1058 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
VNN3-208ENST00000427187 TEX13BQ9BXU2 312 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 KANSL2Q9H9L4 492 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 RAVER2Q9HCJ3 691 aaKnown RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 ATP8A2Q9NTI2 1148 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 PAG1Q9NWQ8 432 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 YBX2Q9Y2T7 364 aaKnown RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
VNN3-208ENST00000427187 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 GREB1LQ9C091 1923 aaPredicted RBP10.43□□□□□ -0.74
VNN3-208ENST00000427187 DNAJC25-GNG10A0A024R161 153 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 A0A0U1RQG5 324 aaPredicted RBP10.42□□□□□ -0.74
VNN3-208ENST00000427187 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.42□□□□□ -0.74
VNN3-208ENST00000427187 ARVCFO00192 962 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 IFIT2P09913 472 aaKnown RBP10.42□□□□□ -0.74
VNN3-208ENST00000427187 RABGGTBP53611 331 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 GNASQ5JWF2 1037 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 CTR9Q6PD62 1173 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 OTOP2Q7RTS6 562 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 FAM126BQ8IXS8 530 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 AMOTL1Q8IY63 956 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 CLASRPQ8N2M8 674 aaKnown RBP10.42□□□□□ -0.74
VNN3-208ENST00000427187 TMEM199Q8N511 208 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 KIFC2Q96AC6 838 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 CHMP4CQ96CF2 233 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 MYH4Q9Y623 1939 aa10.42□□□□□ -0.74
VNN3-208ENST00000427187 ELP1O95163 1332 aa10.41□□□□□ -0.74
VNN3-208ENST00000427187 MROH7Q68CQ1 1323 aa10.41□□□□□ -0.74
VNN3-208ENST00000427187 CTAGE5O15320 804 aa10.41□□□□□ -0.74
VNN3-208ENST00000427187 NDUFB10O96000 172 aa10.41□□□□□ -0.74
VNN3-208ENST00000427187 MYOGP15173 224 aa10.41□□□□□ -0.74
VNN3-208ENST00000427187 CST5P28325 142 aaPredicted RBP10.41□□□□□ -0.74
VNN3-208ENST00000427187 COPB2P35606 906 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms