RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 ADGRF4Q8IZF3 695 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 PRPF38AQ8NAV1 312 aaKnown RBP11.92□□□□□ -0.5
MDC1-205ENST00000425072 GBA2Q9HCG7 927 aaPredicted RBP11.92□□□□□ -0.5
MDC1-205ENST00000425072 MTMR6Q9Y217 621 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 ATAD5Q96QE3 1844 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 UBE2Q2LH0YL09 131 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
MDC1-205ENST00000425072 STAT2P52630 851 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 GNL2Q13823 731 aaKnown RBP11.91□□□□□ -0.5
MDC1-205ENST00000425072 PKN1Q16512 942 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 KRT40Q6A162 431 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 MCTP1Q6DN14 999 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 FASTKD5Q7L8L6 764 aaKnown RBP11.91□□□□□ -0.5
MDC1-205ENST00000425072 SPICE1Q8N0Z3 855 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 C12orf42Q96LP6 360 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 GLT8D2Q9H1C3 349 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 ZNF408Q9H9D4 720 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 JMJD4Q9H9V9 463 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 BRMS1Q9HCU9 246 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 SNCAIPQ9Y6H5 919 aa11.91□□□□□ -0.5
MDC1-205ENST00000425072 CNTNAP5Q8WYK1 1306 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 TRIM75PA6NK02 468 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 TRAF5O00463 557 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 ZBTB5O15062 677 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 CYTH3O43739 400 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 TOMM70O94826 608 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 CELF2O95319 508 aaKnown RBP11.9□□□□□ -0.5
MDC1-205ENST00000425072 F13A1P00488 732 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 GNA11P29992 359 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 NLRP5P59047 1200 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 PPIL2Q13356 520 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 MTMR2Q13614 643 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
MDC1-205ENST00000425072 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 SYDE2Q5VT97 1194 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 ATL3Q6DD88 541 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 TTBK2Q6IQ55 1244 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 CCDC148Q8NFR7 591 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 TNPO1Q92973 898 aaKnown RBP11.9□□□□□ -0.5
MDC1-205ENST00000425072 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 PIGSQ96S52 555 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 ELP3Q9H9T3 547 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 C6orf50Q9HD87 102 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 ZDHHC9Q9Y397 364 aa11.9□□□□□ -0.5
MDC1-205ENST00000425072 CTDP1Q9Y5B0 961 aaPredicted RBP11.9□□□□□ -0.5
MDC1-205ENST00000425072 DOCK1Q14185 1865 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 GOLGA6L22H0YM25 854 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 ZBED4O75132 1171 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 SLC16A2P36021 539 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 MRPL12P52815 198 aaKnown RBP11.89□□□□□ -0.51
MDC1-205ENST00000425072 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 PABPC4Q13310 644 aaKnown RBP eCLIP11.89□□□□□ -0.51
MDC1-205ENST00000425072 COG2Q14746 738 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 CLEC17AQ6ZS10 378 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 BRAPQ7Z569 592 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 PROCA1Q8NCQ7 364 aaPredicted RBP11.89□□□□□ -0.51
MDC1-205ENST00000425072 SMC1BQ8NDV3 1235 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 BICD2Q8TD16 824 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 AMNQ9BXJ7 453 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 FOXP1Q9H334 677 aaPredicted RBP11.89□□□□□ -0.51
MDC1-205ENST00000425072 BARHL2Q9NY43 387 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 CFAP45Q9UL16 551 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
MDC1-205ENST00000425072 SSC5DA1L4H1 1573 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 DTNBO60941 627 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 MMP1P03956 469 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 HMGCS2P54868 508 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 GUCY1B3Q02153 619 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 PKP1Q13835 747 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 MCTP2Q6DN12 878 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 HEATR3Q7Z4Q2 680 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 CCDC84Q86UT8 332 aaPredicted RBP11.88□□□□□ -0.51
MDC1-205ENST00000425072 FBXO11Q86XK2 927 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 OPTNQ96CV9 577 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 ZNF396Q96N95 335 aaPredicted RBP11.88□□□□□ -0.51
MDC1-205ENST00000425072 AIFM3Q96NN9 605 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms