RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 IRS1P35568 1242 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 SLC4A3P48751 1232 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 ZP2Q05996 745 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 NBPF20Q3BBV1 942 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 LBX2Q6XYB7 198 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 DGLUCYQ7Z3D6 616 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 ADHFE1Q8IWW8 467 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 MB21D1Q8N884 522 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 KLHDC9Q8NEP7 349 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 PHOSPHO2Q8TCD6 241 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 TGFBRAP1Q8WUH2 860 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 NOC4LQ9BVI4 516 aaKnown RBP7.79□□□□□ -1.16
SDCBP-203ENST00000424270 KIAA1683Q9H0B3 1180 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 TRPV6Q9H1D0 765 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 PALD1Q9ULE6 856 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 ZDBF2Q9HCK1 2354 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 MPHOSPH10O00566 681 aaKnown RBP7.78□□□□□ -1.16
SDCBP-203ENST00000424270 DUSP11O75319 330 aaKnown RBP7.78□□□□□ -1.16
SDCBP-203ENST00000424270 SLC25A27O95847 323 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 CD4P01730 458 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 PLCG2P16885 1265 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 ITGA7Q13683 1181 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 RASGRF1Q13972 1273 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 CLUL1Q15846 466 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 PTPROQ16827 1216 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 ABCB5Q2M3G0 1257 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 GORABQ5T7V8 394 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 CCDC102BQ68D86 513 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 CXCL17Q6UXB2 119 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 TRIM67Q6ZTA4 783 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 ASCL5Q7RTU5 278 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 FBXL6Q8N531 539 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 ZNF579Q8NAF0 562 aaKnown RBP7.78□□□□□ -1.16
SDCBP-203ENST00000424270 RETREG2Q8NC44 543 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 EDAQ92838 391 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 DDX11Q96FC9 970 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 WNT8AQ9H1J5 351 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 AATFQ9NY61 560 aaKnown RBP eCLIP7.78□□□□□ -1.16
SDCBP-203ENST00000424270 LRP2BPQ9P2M1 347 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 ZNF236Q9UL36 1845 aa7.78□□□□□ -1.16
SDCBP-203ENST00000424270 ROBO3Q96MS0 1386 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 MED19A0JLT2 244 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-203ENST00000424270 RAD21O60216 631 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 ZEB2O60315 1214 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 B4GALT4O60513 344 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 LPXNO60711 386 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 ARHGEF15O94989 841 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 IRX5P78411 483 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-203ENST00000424270 BEX3Q00994 111 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 RALBP1Q15311 655 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 CERKLQ49MI3 558 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-203ENST00000424270 SPRED2Q7Z698 418 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 ADSSL1Q8N142 457 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 ACER1Q8TDN7 264 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 TGS1Q96RS0 853 aaKnown RBP7.77□□□□□ -1.17
SDCBP-203ENST00000424270 FSD1Q9BTV5 496 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 CNTNAP3Q9BZ76 1288 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 DNAJC18Q9H819 358 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 CLDND1Q9NY35 253 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 CTNNA3Q9UI47 895 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 REV3LO60673 3130 aa7.77□□□□□ -1.17
SDCBP-203ENST00000424270 PRR23AA6NEV1 266 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 CABYRO75952 493 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 SUPT20HL2P0C7V6 817 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 CST5P28325 142 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-203ENST00000424270 ADORA1P30542 326 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 HERC4Q5GLZ8 1057 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-203ENST00000424270 FAM47CQ5HY64 1035 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 CCSAPQ6IQ19 270 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-203ENST00000424270 TBC1D9Q6ZT07 1266 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 ANKRD44Q8N8A2 993 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 FBXO22Q8NEZ5 403 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 NKD2Q969F2 451 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-203ENST00000424270 ATG4CQ96DT6 458 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 KAZALD1Q96I82 304 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 AP5M1Q9H0R1 490 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 SUGCTQ9HAC7 445 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 DIS3Q9Y2L1 958 aaKnown RBP7.76□□□□□ -1.17
SDCBP-203ENST00000424270 WDFY4Q6ZS81 3184 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 COL4A4P53420 1690 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-203ENST00000424270 FLT1P17948 1338 aa7.76□□□□□ -1.17
SDCBP-203ENST00000424270 ZFHX2Q9C0A1 2572 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-203ENST00000424270 LCHNA4D1U4 455 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 STXBP3O00186 592 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 CYP2C9P11712 490 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 USP5P45974 858 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 GJA9P57773 515 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 PSMC6P62333 389 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 ACVR2BQ13705 512 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 MVPQ14764 893 aaKnown RBP7.75□□□□□ -1.17
SDCBP-203ENST00000424270 ZNF792Q3KQV3 632 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 CCDC144BQ3MJ40 725 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 RABL6Q3YEC7 729 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-203ENST00000424270 TIGD5Q53EQ6 642 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 NAA16Q6N069 864 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-203ENST00000424270 FAM117BQ6P1L5 589 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 BMP8AQ7Z5Y6 402 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 TMCO2Q7Z6W1 182 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms