RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 PARP14Q460N5 1801 aa23.23■■□□□ 1.31
FBXO28-202ENST00000424254 FCER1AP12319 257 aa23.22■■□□□ 1.31
FBXO28-202ENST00000424254 CHMLP26374 656 aa23.22■■□□□ 1.31
FBXO28-202ENST00000424254 CYP2C19P33261 490 aa23.22■■□□□ 1.31
FBXO28-202ENST00000424254 MFSD14CQ5VZR4 134 aa23.22■■□□□ 1.31
FBXO28-202ENST00000424254 SNRNP48Q6IEG0 339 aaKnown RBP23.22■■□□□ 1.31
FBXO28-202ENST00000424254 SLC38A10Q9HBR0 1119 aa23.22■■□□□ 1.31
FBXO28-202ENST00000424254 RIPK3Q9Y572 518 aa23.22■■□□□ 1.31
FBXO28-202ENST00000424254 ATP2A1O14983 1001 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 ZBED4O75132 1171 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 COPB2P35606 906 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 KCTD1Q719H9 257 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 CPXCR1Q8N123 301 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 MMP19Q99542 508 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 TMEM47Q9BQJ4 181 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 RAVER2Q9HCJ3 691 aaKnown RBP23.21■■□□□ 1.31
FBXO28-202ENST00000424254 MTMR7Q9Y216 660 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 PDE4DIPQ5VU43 2346 aa23.21■■□□□ 1.31
FBXO28-202ENST00000424254 RAD50Q92878 1312 aa23.2■■□□□ 1.31
FBXO28-202ENST00000424254 STAT2P52630 851 aa23.2■■□□□ 1.3
FBXO28-202ENST00000424254 OLFML2BQ68BL8 750 aa23.2■■□□□ 1.3
FBXO28-202ENST00000424254 ZNF236Q9UL36 1845 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 PGK2P07205 417 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 TOP1P11387 765 aaKnown RBP23.19■■□□□ 1.3
FBXO28-202ENST00000424254 CAPN2P17655 700 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 IKQ13123 557 aaPredicted RBP23.19■■□□□ 1.3
FBXO28-202ENST00000424254 KCTD2Q14681 263 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 IMMTQ16891 758 aaKnown RBP23.19■■□□□ 1.3
FBXO28-202ENST00000424254 RCSD1Q6JBY9 416 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 FAM160B2Q86V87 743 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 SKAP1Q86WV1 359 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
FBXO28-202ENST00000424254 ESR2Q92731 530 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 SLC5A4Q9NY91 659 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 CTNNA3Q9UI47 895 aa23.19■■□□□ 1.3
FBXO28-202ENST00000424254 CTDP1Q9Y5B0 961 aaPredicted RBP23.19■■□□□ 1.3
FBXO28-202ENST00000424254 SLC4A3P48751 1232 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 LHX8Q68G74 356 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
FBXO28-202ENST00000424254 TRPV1Q8NER1 839 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 CHURC1Q8WUH1 139 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 MAML3Q96JK9 1138 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 OGDHLQ9ULD0 1010 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 MYH4Q9Y623 1939 aa23.18■■□□□ 1.3
FBXO28-202ENST00000424254 PLA2G6O60733 806 aa23.17■■□□□ 1.3
FBXO28-202ENST00000424254 KDM4AO75164 1064 aa23.17■■□□□ 1.3
FBXO28-202ENST00000424254 MNX1P50219 401 aaPredicted RBP23.17■■□□□ 1.3
FBXO28-202ENST00000424254 CCDC96Q2M329 555 aa23.17■■□□□ 1.3
FBXO28-202ENST00000424254 DCAF4Q8WV16 495 aa23.17■■□□□ 1.3
FBXO28-202ENST00000424254 RUFY2Q8WXA3 655 aa23.17■■□□□ 1.3
FBXO28-202ENST00000424254 PAWRQ96IZ0 340 aaKnown RBP23.17■■□□□ 1.3
FBXO28-202ENST00000424254 ZKSCAN3Q9BRR0 538 aa23.17■■□□□ 1.3
FBXO28-202ENST00000424254 CYBAP13498 195 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 OAZ1P54368 228 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 PTH1RQ03431 593 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 ZNF792Q3KQV3 632 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 ANKLE1Q8NAG6 615 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 TTC14Q96N46 770 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 ZNF536O15090 1300 aa23.16■■□□□ 1.3
FBXO28-202ENST00000424254 B4E1Z4 1266 aa23.15■■□□□ 1.3
FBXO28-202ENST00000424254 SGSM2O43147 1006 aa23.15■■□□□ 1.3
FBXO28-202ENST00000424254 FDX1P10109 184 aa23.15■■□□□ 1.3
FBXO28-202ENST00000424254 SNAP25P60880 206 aa23.15■■□□□ 1.3
FBXO28-202ENST00000424254 TTBK2Q6IQ55 1244 aa23.15■■□□□ 1.3
FBXO28-202ENST00000424254 PRR12Q9ULL5 1215 aa23.15■■□□□ 1.3
FBXO28-202ENST00000424254 FRMPD2Q68DX3 1309 aaPredicted RBP23.15■■□□□ 1.3
FBXO28-202ENST00000424254 COL11A1P12107 1806 aaPredicted RBP23.15■■□□□ 1.3
FBXO28-202ENST00000424254 CNGA1P29973 690 aa23.14■■□□□ 1.3
FBXO28-202ENST00000424254 NT5C2P49902 561 aa23.14■■□□□ 1.3
FBXO28-202ENST00000424254 DPF3Q92784 378 aa23.14■■□□□ 1.3
FBXO28-202ENST00000424254 AGBL1Q96MI9 1066 aa23.14■■□□□ 1.3
FBXO28-202ENST00000424254 HTATIP2Q9BUP3 242 aa23.14■■□□□ 1.3
FBXO28-202ENST00000424254 DDX20Q9UHI6 824 aaKnown RBP23.14■■□□□ 1.3
FBXO28-202ENST00000424254 PDHBP11177 359 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 SLC16A2P36021 539 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 PRAMEF19Q5SWL8 479 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.13■■□□□ 1.29
FBXO28-202ENST00000424254 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 DGKHQ86XP1 1220 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 HOMER2Q9NSB8 354 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 ZSWIM5Q9P217 1185 aa23.13■■□□□ 1.29
FBXO28-202ENST00000424254 DIS3Q9Y2L1 958 aaKnown RBP23.13■■□□□ 1.29
FBXO28-202ENST00000424254 DNAJC25-GNG10A0A024R161 153 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 CCDC174Q6PII3 467 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 BTNL9Q6UXG8 535 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 IQCA1Q86XH1 822 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 CHST13Q8NET6 341 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 DDX11Q96FC9 970 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 GPCPD1Q9NPB8 672 aa23.12■■□□□ 1.29
FBXO28-202ENST00000424254 SNHG28P0DPA3 235 aa23.11■■□□□ 1.29
FBXO28-202ENST00000424254 ZSCAN10Q96SZ4 725 aaPredicted RBP23.11■■□□□ 1.29
FBXO28-202ENST00000424254 KRT23Q9C075 422 aa23.11■■□□□ 1.29
FBXO28-202ENST00000424254 CNNM2Q9H8M5 875 aa23.11■■□□□ 1.29
FBXO28-202ENST00000424254 FBXO40Q9UH90 709 aa23.11■■□□□ 1.29
FBXO28-202ENST00000424254 LAMA4Q16363 1823 aa23.11■■□□□ 1.29
FBXO28-202ENST00000424254 MSCO60682 206 aa23.1■■□□□ 1.29
FBXO28-202ENST00000424254 CYP21A2P08686 494 aa23.1■■□□□ 1.29
FBXO28-202ENST00000424254 ZNF543Q08ER8 600 aa23.1■■□□□ 1.29
FBXO28-202ENST00000424254 SYDE2Q5VT97 1194 aa23.1■■□□□ 1.29
FBXO28-202ENST00000424254 ANKRD35Q8N283 1001 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms