RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 ANAPC15P60006 121 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 PKN2Q16513 984 aaKnown RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 ASPRV1Q53RT3 343 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 TMEM67Q5HYA8 995 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 CTU1Q7Z7A3 348 aaKnown RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 P2RX7Q99572 595 aaKnown RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 ZKSCAN3Q9BRR0 538 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 PNMA2Q9UL42 364 aa13.7□□□□□ -0.22
LMO3-206ENST00000424192 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
LMO3-206ENST00000424192 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 PDHBP11177 359 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 MAPK4P31152 587 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 ERVK-9P63128 1117 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 ERVK-24P63145 666 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 SEC23AQ15436 765 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
LMO3-206ENST00000424192 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
LMO3-206ENST00000424192 DDAH1O94760 285 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 HOXD10P28358 340 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 LIFRP42702 1097 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 OAZ1P54368 228 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 ANTXR2P58335 489 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
LMO3-206ENST00000424192 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 JAKMIP1Q96N16 626 aaKnown RBP13.68□□□□□ -0.22
LMO3-206ENST00000424192 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
LMO3-206ENST00000424192 EFCC1Q9HA90 598 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
LMO3-206ENST00000424192 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
LMO3-206ENST00000424192 SNX14Q9Y5W7 946 aa13.68□□□□□ -0.22
LMO3-206ENST00000424192 RLFQ13129 1914 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 VWA5AO00534 786 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 SH2B2O14492 632 aaPredicted RBP13.67□□□□□ -0.22
LMO3-206ENST00000424192 ZBED4O75132 1171 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 CALM1P0DP23 149 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 CALM2P0DP24 149 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 CALM3P0DP25 149 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 KIF5BP33176 963 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 FGD1P98174 961 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 EFCAB3Q8N7B9 438 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 SHCBP1Q8NEM2 672 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 SOCS4Q8WXH5 440 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 COA7Q96BR5 231 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 ATG4CQ96DT6 458 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 ADAMTS5Q9UNA0 930 aa13.67□□□□□ -0.22
LMO3-206ENST00000424192 TNPO2O14787 897 aaKnown RBP13.66□□□□□ -0.22
LMO3-206ENST00000424192 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
LMO3-206ENST00000424192 SLC25A27O95847 323 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 PARP1P09874 1014 aaKnown RBP13.66□□□□□ -0.22
LMO3-206ENST00000424192 PSMC4P43686 418 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 RCAN1P53805 252 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 C8orf34Q49A92 452 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 BTNL9Q6UXG8 535 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 SGMS1Q86VZ5 419 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 IGDCC4Q8TDY8 1250 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 KIFC2Q96AC6 838 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 SPATC1LQ9H0A9 340 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 LY9Q9HBG7 655 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 FBXO28Q9NVF7 368 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 IVNS1ABPQ9Y6Y0 642 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 ZNF236Q9UL36 1845 aa13.66□□□□□ -0.22
LMO3-206ENST00000424192 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
LMO3-206ENST00000424192 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 CTCFLQ8NI51 663 aaPredicted RBP13.65□□□□□ -0.22
LMO3-206ENST00000424192 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 MROH8Q9H579 483 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 SLC38A10Q9HBR0 1119 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 TXNRD2Q9NNW7 524 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 TRIM17Q9Y577 477 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
LMO3-206ENST00000424192 MGAMO43451 1857 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 CNMDO75829 334 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 GNAQP50148 359 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms