RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 C16orf86Q6ZW13 317 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 ZNF467Q7Z7K2 595 aaPredicted RBP20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 TMEM199Q8N511 208 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 PCSK9Q8NBP7 692 aaKnown RBP20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 PRDM12Q9H4Q4 367 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 THEGQ9P2T0 379 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 CHD9Q3L8U1 2897 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 MYADML2A6NDP7 307 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 GOLIM4O00461 696 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 CSF2RAP15509 400 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 MRPS5P82675 430 aaKnown RBP20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 PPM1EQ8WY54 764 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 TEX13BQ9BXU2 312 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
CHCHD3-202ENST00000423635 ARVCFO00192 962 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 ASGR1P07306 291 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 GJA9P57773 515 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 HSP90AB4PQ58FF6 505 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 PSRC1Q6PGN9 363 aaPredicted RBP20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 ZNF365Q70YC5 407 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 ITPRIPQ8IWB1 547 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 RHPN1Q8TCX5 695 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 UPF3AQ9H1J1 476 aaKnown RBP20.16■□□□□ 0.82
CHCHD3-202ENST00000423635 MYO9BQ13459 2157 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 MYH8P13535 1937 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 CYP2D7A0A087X1C5 515 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 USP17L12C9JPN9 530 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 USP17L21D6R901 530 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 RLBP1P12271 317 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 ADD2P35612 726 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 NKX3-2P78367 333 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 ACVR2BQ13705 512 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 FAM126BQ8IXS8 530 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 FTSJ3Q8IY81 847 aaKnown RBP20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 ADAMTS19Q8TE59 1207 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 HERVK_113Q902F9 699 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 ZHX1Q9UKY1 873 aaPredicted RBP20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 RIPK3Q9Y572 518 aa20.15■□□□□ 0.82
CHCHD3-202ENST00000423635 A0A0U1RQG5 324 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 ATP2A1O14983 1001 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 C6orf222P0C671 652 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 IRX5P78411 483 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 RAB30Q15771 203 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 DNAJC2Q99543 621 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 SLF1Q9BQI6 1058 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 ABHD16BQ9H3Z7 469 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 SPC25Q9HBM1 224 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 RAPGEFL1Q9UHV5 662 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 MSRAQ9UJ68 235 aa20.14■□□□□ 0.81
CHCHD3-202ENST00000423635 NCOR1O75376 2440 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 ADCY6O43306 1168 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 MBD4O95243 580 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 CD4P01730 458 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 ACRP10323 421 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 SNRNP48Q6IEG0 339 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 PRPF38AQ8NAV1 312 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 VTI1AQ96AJ9 217 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 IL23AQ9NPF7 189 aa20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.13■□□□□ 0.81
CHCHD3-202ENST00000423635 TLR3O15455 904 aaKnown RBP20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 CCDC144BQ3MJ40 725 aa20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 SLFNL1Q499Z3 407 aa20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 GNASQ5JWF2 1037 aa20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 CTR9Q6PD62 1173 aa20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 UHRF1Q96T88 793 aaPredicted RBP20.12■□□□□ 0.81
CHCHD3-202ENST00000423635 BAZ2AQ9UIF9 1905 aaKnown RBP20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 CTAGE5O15320 804 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 RAD21O60216 631 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 SLC43A3Q8NBI5 491 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 KIF1BPQ96EK5 621 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 FGD4Q96M96 766 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 PPP1R12CQ9BZL4 782 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 PAG1Q9NWQ8 432 aa20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 CXXC1Q9P0U4 656 aaPredicted RBP20.11■□□□□ 0.81
CHCHD3-202ENST00000423635 F5H6K3 240 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 CCER2I3L3R5 266 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 FGBP02675 491 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 PLA2G5P39877 138 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 KLRC3Q07444 240 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 UBE3CQ15386 1083 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 CCDC85BQ15834 202 aaPredicted RBP20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 KATNBL1Q9H079 304 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 SLC28A3Q9HAS3 691 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 NYAP2Q9P242 653 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 CHD7Q9P2D1 2997 aa20.1■□□□□ 0.81
CHCHD3-202ENST00000423635 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
CHCHD3-202ENST00000423635 IGFBP4P22692 258 aa20.09■□□□□ 0.81
CHCHD3-202ENST00000423635 CYP2C18P33260 490 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms