RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 MIPOL1Q8TD10 442 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 ATP6V0A1Q93050 837 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 SUGT1Q9Y2Z0 365 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 TBC1D8BQ0IIM8 1120 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 ALKBH8Q96BT7 664 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 DEXIO95424 95 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 NXNQ6DKJ4 435 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 LZICQ8WZA0 190 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 LRRC4Q9HBW1 653 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 FBXW10Q5XX13 1052 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 VCXQ9H320 206 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 A6NNZ2 444 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 ACTN1P12814 892 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 VEPH1Q14D04 833 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 TUBB8Q3ZCM7 444 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 ATL3Q6DD88 541 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 JADE1Q6IE81 842 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 KDRP35968 1356 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 CASP2P42575 452 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 DDX53Q86TM3 631 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 CCDC170Q8IYT3 715 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
SCN5A-205ENST00000423572 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
SCN5A-205ENST00000423572 BRD1O95696 1058 aa12.15□□□□□ -0.47
SCN5A-205ENST00000423572 GKAP1Q5VSY0 366 aaPredicted RBP12.15□□□□□ -0.47
SCN5A-205ENST00000423572 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.47
SCN5A-205ENST00000423572 SLC38A10Q9HBR0 1119 aa12.15□□□□□ -0.47
SCN5A-205ENST00000423572 ARFGAP3Q9NP61 516 aa12.15□□□□□ -0.47
SCN5A-205ENST00000423572 ZNF165P49910 485 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CAPZA3Q96KX2 299 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CTNND2Q9UQB3 1225 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CTAGE15A4D2H0 777 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 USP17L3A6NCW0 530 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 USP17L4A6NCW7 530 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 B4E1Z4 1266 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 KIF3CO14782 793 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 SPTLC2O15270 562 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CTAGE8P0CG41 777 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 USP17L1Q7RTZ2 530 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CTAGE6Q86UF2 777 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CTAGE4Q8IX94 777 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 TMCO5AQ8N6Q1 288 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CTTNBP2NLQ9P2B4 639 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CYP2J2P51589 502 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 IRAK1BP1Q5VVH5 260 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 PPP1R16BQ96T49 567 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 XDHP47989 1333 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 TNPO2O14787 897 aaKnown RBP12.14□□□□□ -0.47
SCN5A-205ENST00000423572 MAP3K13O43283 966 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 LRRC47Q8N1G4 583 aaKnown RBP12.14□□□□□ -0.47
SCN5A-205ENST00000423572 RAB42Q8N4Z0 105 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 RIC8AQ9NPQ8 531 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 MYO1AQ9UBC5 1043 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 LUC7L2Q9Y383 392 aaKnown RBP12.14□□□□□ -0.47
SCN5A-205ENST00000423572 TMCO4Q5TGY1 634 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 PLCB1Q9NQ66 1216 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 CASQ2O14958 399 aaPredicted RBP12.14□□□□□ -0.47
SCN5A-205ENST00000423572 MARK3P27448 753 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 STX17P56962 302 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 SIX6OS1Q8N1H7 587 aa12.14□□□□□ -0.47
SCN5A-205ENST00000423572 PRDM1O75626 825 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 PMLP29590 882 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
SCN5A-205ENST00000423572 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 F13A1P00488 732 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 SERPINB2P05120 415 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 STAT2P52630 851 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 NMIQ13287 307 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-205ENST00000423572 TWF2Q6IBS0 349 aaKnown RBP12.13□□□□□ -0.47
SCN5A-205ENST00000423572 C10orf67Q8IYJ2 551 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 AFG1LQ8WV93 481 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 FAM149B1Q96BN6 582 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 LRWD1Q9UFC0 647 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 DONSONQ9NYP3 566 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 TSPY1Q01534 308 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 TFAP4Q01664 338 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
SCN5A-205ENST00000423572 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 ZMYND10O75800 440 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms