RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 HOMER2Q9NSB8 354 aa11.35□□□□□ -0.59
HERC3-204ENST00000422770 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
HERC3-204ENST00000422770 ZSWIM5Q9P217 1185 aa11.35□□□□□ -0.59
HERC3-204ENST00000422770 ZNF236Q9UL36 1845 aa11.35□□□□□ -0.59
HERC3-204ENST00000422770 E7EWF7 191 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 IFIT3O14879 490 aaKnown RBP11.34□□□□□ -0.59
HERC3-204ENST00000422770 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
HERC3-204ENST00000422770 SLC16A2P36021 539 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 SNAP25P60880 206 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
HERC3-204ENST00000422770 MTFR1Q15390 333 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 IFIT1BQ5T764 474 aaKnown RBP11.34□□□□□ -0.59
HERC3-204ENST00000422770 RCSD1Q6JBY9 416 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 CYB5R4Q7L1T6 521 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 ZNF333Q96JL9 665 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 APBA2Q99767 749 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 LSG1Q9H089 658 aaKnown RBP11.34□□□□□ -0.59
HERC3-204ENST00000422770 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
HERC3-204ENST00000422770 SLC15A5A6NIM6 579 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 SLC27A2O14975 620 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 SLC25A27O95847 323 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 HMGCRP04035 888 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 GOLGA8HP0CJ92 632 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 FCER1AP12319 257 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 CCL5P13501 91 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 PTPREP23469 700 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 ADORA2AP29274 412 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 MAP2K5Q13163 448 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 IRF5Q13568 498 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 KCTD2Q14681 263 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 TTBK2Q6IQ55 1244 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
HERC3-204ENST00000422770 SHCBP1Q8NEM2 672 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 TTC14Q96N46 770 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 MMP19Q99542 508 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 TEX13BQ9BXU2 312 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 MROH8Q9H579 483 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 GJD2Q9UKL4 321 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
HERC3-204ENST00000422770 FRMPD3Q5JV73 1810 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 PDHBP11177 359 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 ALAS1P13196 640 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 COPB2P35606 906 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 WTAPQ15007 396 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 CCL14Q16627 93 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 MORN1Q5T089 497 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 DGKHQ86XP1 1220 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 PXYLP1Q8TE99 480 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 TRIB2Q92519 343 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 UPF2Q9HAU5 1272 aaKnown RBP11.32□□□□□ -0.6
HERC3-204ENST00000422770 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
HERC3-204ENST00000422770 ZNF214Q9UL59 606 aaPredicted RBP11.32□□□□□ -0.6
HERC3-204ENST00000422770 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 MCM3APO60318 1980 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 STRNO43815 780 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 PGK2P07205 417 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 PARP1P09874 1014 aaKnown RBP11.31□□□□□ -0.6
HERC3-204ENST00000422770 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
HERC3-204ENST00000422770 CNGA1P29973 690 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 NT5C2P49902 561 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 TRIM32Q13049 653 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 GRB14Q14449 540 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
HERC3-204ENST00000422770 AGBL1Q96MI9 1066 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 CCPG1Q9ULG6 757 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 ADAMTS5Q9UNA0 930 aa11.31□□□□□ -0.6
HERC3-204ENST00000422770 PRC1O43663 620 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 REC8O95072 547 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 SEC24BO95487 1268 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 FDX1P10109 184 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 TAL1P17542 331 aaPredicted RBP11.3□□□□□ -0.6
HERC3-204ENST00000422770 EN2P19622 333 aaPredicted RBP11.3□□□□□ -0.6
HERC3-204ENST00000422770 NOVP48745 357 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 GPATCH4Q5T3I0 446 aaKnown RBP11.3□□□□□ -0.6
HERC3-204ENST00000422770 ANKRD35Q8N283 1001 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 NPLOC4Q8TAT6 608 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 DEFB118Q96PH6 123 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms