RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 CCND3P30281 292 aaPredicted RBP9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 COL9A3Q14050 684 aaPredicted RBP9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 ZMYM1Q5SVZ6 1142 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 MFSD14CQ5VZR4 134 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 ZNF589Q86UQ0 364 aaPredicted RBP9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 ATG4CQ96DT6 458 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 IPO9Q96P70 1041 aaKnown RBP9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 FSD1Q9BTV5 496 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 NACAP1Q9BZK3 213 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 NBPF3Q9H094 633 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 MROH8Q9H579 483 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 INCENPQ9NQS7 918 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 FLRT1Q9NZU1 646 aa9.77□□□□□ -0.85
TRIM43CP-201ENST00000422468 ATMINO43313 823 aaPredicted RBP9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 ERCC3P19447 782 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 ADORA2AP29274 412 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 PLS1Q14651 629 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 DPP9Q86TI2 863 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 ZNF444Q8N0Y2 327 aaPredicted RBP9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 ABRAQ8N0Z2 381 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 STK11IPQ8N1F8 1099 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 OSBPL3Q9H4L5 887 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 C11orf49Q9H6J7 331 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 NYAP2Q9P242 653 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 ADAMTS5Q9UNA0 930 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 LAMA4Q16363 1823 aa9.76□□□□□ -0.85
TRIM43CP-201ENST00000422468 IGKV6D-41A0A0C4DH26 115 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 VWA5AO00534 786 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 RAD21O60216 631 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 SLC25A27O95847 323 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 IGHA2P01877 340 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 TMEM132BQ14DG7 1078 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 FAM83BQ5T0W9 1011 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 OLFML2BQ68BL8 750 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 NCAPG2Q86XI2 1143 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 NPLOC4Q8TAT6 608 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 SLC5A4Q9NY91 659 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 PPP1R9AQ9ULJ8 1098 aa9.75□□□□□ -0.85
TRIM43CP-201ENST00000422468 SZT2Q5T011 3432 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 F5H6K3 240 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 MSCO60682 206 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 PRDM1O75626 825 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 SLC3A2P08195 630 aaKnown RBP9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 COL6A1P12109 1028 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 FCER1AP12319 257 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 CYP2C19P33261 490 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 FXR1P51114 621 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 PDE4BQ07343 736 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 KLRC3Q07444 240 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 NMIQ13287 307 aaPredicted RBP9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 TICAM2Q86XR7 235 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 MKL1Q969V6 931 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 EVI5LQ96CN4 794 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 NAPBQ9H115 298 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 PRO3102Q9H379 93 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 RWDD1Q9H446 243 aaPredicted RBP9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 RBM27Q9P2N5 1060 aaKnown RBP9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 CLIP2Q9UDT6 1046 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 SYNPO2Q9UMS6 1093 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 TAF6LQ9Y6J9 622 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 PLIN4Q96Q06 1357 aa9.74□□□□□ -0.85
TRIM43CP-201ENST00000422468 COBLO75128 1261 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 SEC24BO95487 1268 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 TTLL1O95922 423 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 NDUFB10O96000 172 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 CYBAP13498 195 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 CNGA1P29973 690 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 COPB2P35606 906 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 STAT3P40763 770 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 PPARAQ07869 468 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 RASGRP2Q7LDG7 609 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 RIOX2Q8IUF8 465 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 C7orf61Q8IZ16 206 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 TRPV1Q8NER1 839 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 REPS2Q8NFH8 660 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 NEDD1Q8NHV4 660 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 CEP95Q96GE4 821 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 MMP19Q99542 508 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 NUP88Q99567 741 aaPredicted RBP9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 SLF1Q9BQI6 1058 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 MTMR4Q9NYA4 1195 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 ZNF214Q9UL59 606 aaPredicted RBP9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 PFASO15067 1338 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 SMCHD1A6NHR9 2005 aa9.73□□□□□ -0.85
TRIM43CP-201ENST00000422468 TSPY3P0CV98 308 aa9.72□□□□□ -0.85
TRIM43CP-201ENST00000422468 TSPY8P0CW00 308 aa9.72□□□□□ -0.85
TRIM43CP-201ENST00000422468 SDSP20132 328 aa9.72□□□□□ -0.85
TRIM43CP-201ENST00000422468 TFAP4Q01664 338 aa9.72□□□□□ -0.85
TRIM43CP-201ENST00000422468 KCTD2Q14681 263 aa9.72□□□□□ -0.85
TRIM43CP-201ENST00000422468 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
TRIM43CP-201ENST00000422468 GMCL1P1Q8NEA9 526 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms