RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SEPT4O43236 478 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 TRIM32Q13049 653 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 NMIQ13287 307 aaPredicted RBP10.21□□□□□ -0.77
MDC1-204ENST00000422266 TKFCQ3LXA3 575 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 FAM47AQ5JRC9 791 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 AKNAD1Q5T1N1 836 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 SNRNP48Q6IEG0 339 aaKnown RBP10.21□□□□□ -0.77
MDC1-204ENST00000422266 CCDC129Q6ZRS4 1044 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.21□□□□□ -0.77
MDC1-204ENST00000422266 IQCA1Q86XH1 822 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 STAG1Q8WVM7 1258 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 ESR2Q92731 530 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 KIFC2Q96AC6 838 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 DDX11Q96FC9 970 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 FAM227BQ96M60 508 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 SLC38A10Q9HBR0 1119 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 FBXO28Q9NVF7 368 aa10.21□□□□□ -0.77
MDC1-204ENST00000422266 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.77
MDC1-204ENST00000422266 A0A0G2JMZ2 1700 aa10.21□□□□□ -0.78
MDC1-204ENST00000422266 PLXNB2O15031 1838 aa10.21□□□□□ -0.78
MDC1-204ENST00000422266 H0YGN5 161 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 DNM1LO00429 736 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 SLC34A2O95436 690 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 CENPBP07199 599 aaPredicted RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 CYBAP13498 195 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 CCND3P30281 292 aaPredicted RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 IMMTQ16891 758 aaKnown RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 VPS53Q5VIR6 699 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 LHX8Q68G74 356 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 CWC27Q6UX04 472 aaKnown RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 LRRC47Q8N1G4 583 aaKnown RBP10.2□□□□□ -0.78
MDC1-204ENST00000422266 REPS2Q8NFH8 660 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 DCAF4Q8WV16 495 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 MAML3Q96JK9 1138 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 DSCC1Q9BVC3 393 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 CNPY2Q9Y2B0 182 aa10.2□□□□□ -0.78
MDC1-204ENST00000422266 RLFQ13129 1914 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 RAD50Q92878 1312 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 SYNGAP1Q96PV0 1343 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 A0A1W2PPC1 479 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 TMEM232C9JQI7 657 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 KBTBD13C9JR72 458 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 FOXP2O15409 715 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 COBLO75128 1261 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 IGHA2P01877 340 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 CYP2C19P33261 490 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 NOVP48745 357 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 RRP12Q5JTH9 1297 aaKnown RBP10.19□□□□□ -0.78
MDC1-204ENST00000422266 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
MDC1-204ENST00000422266 ZNF589Q86UQ0 364 aaPredicted RBP10.19□□□□□ -0.78
MDC1-204ENST00000422266 CPXCR1Q8N123 301 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 ANKRD35Q8N283 1001 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 NUP88Q99567 741 aaPredicted RBP10.19□□□□□ -0.78
MDC1-204ENST00000422266 TINF2Q9BSI4 451 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 CNNM2Q9H8M5 875 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 FLRT1Q9NZU1 646 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 MYH4Q9Y623 1939 aa10.19□□□□□ -0.78
MDC1-204ENST00000422266 PFASO15067 1338 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 RARBP10826 455 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 MCCP23508 829 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 ZNF792Q3KQV3 632 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
MDC1-204ENST00000422266 RNF180Q86T96 592 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 DGKHQ86XP1 1220 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 KRT23Q9C075 422 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 MAF1Q9H063 256 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 ACAD9Q9H845 621 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 IL17RBQ9NRM6 502 aa10.18□□□□□ -0.78
MDC1-204ENST00000422266 COL6A1P12109 1028 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 AKR1A1P14550 325 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 TRDNQ13061 729 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 CCDC96Q2M329 555 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 MAMDC4Q6UXC1 1216 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 DIS3LQ8TF46 1054 aaKnown RBP10.17□□□□□ -0.78
MDC1-204ENST00000422266 SPC25Q9HBM1 224 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 RAVER2Q9HCJ3 691 aaKnown RBP10.17□□□□□ -0.78
MDC1-204ENST00000422266 PRKAG2Q9UGJ0 569 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 FAM184BQ9ULE4 1060 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 PARP14Q460N5 1801 aa10.17□□□□□ -0.78
MDC1-204ENST00000422266 DNAJC25-GNG10A0A024R161 153 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 LOC102724159A0A0B4J2E5 919 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 ASB14A6NK59 587 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 PGK2P07205 417 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 PWP2Q15269 919 aaKnown RBP10.16□□□□□ -0.78
MDC1-204ENST00000422266 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 MPHOSPH6Q99547 160 aaKnown RBP10.16□□□□□ -0.78
MDC1-204ENST00000422266 TMEM47Q9BQJ4 181 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 SENP6Q9GZR1 1112 aaPredicted RBP10.16□□□□□ -0.78
MDC1-204ENST00000422266 ABHD16BQ9H3Z7 469 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
MDC1-204ENST00000422266 COLQQ9Y215 455 aaPredicted RBP10.16□□□□□ -0.78
MDC1-204ENST00000422266 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
MDC1-204ENST00000422266 COL11A1P12107 1806 aaPredicted RBP10.15□□□□□ -0.78
MDC1-204ENST00000422266 B4DLN1 442 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms