RNA–Protein interactions for RNA: ENST00000422254.5

HDAC7-207, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-207ENST00000422254 LTBP2Q14767 1821 aa18.69■□□□□ 0.58
HDAC7-207ENST00000422254 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
HDAC7-207ENST00000422254 PGK2P07205 417 aa18.68■□□□□ 0.58
HDAC7-207ENST00000422254 RTP1P59025 263 aa18.68■□□□□ 0.58
HDAC7-207ENST00000422254 SNX17Q15036 470 aa18.68■□□□□ 0.58
HDAC7-207ENST00000422254 SKAP1Q86WV1 359 aa18.68■□□□□ 0.58
HDAC7-207ENST00000422254 SEC62Q99442 399 aaKnown RBP18.68■□□□□ 0.58
HDAC7-207ENST00000422254 SLF1Q9BQI6 1058 aa18.68■□□□□ 0.58
HDAC7-207ENST00000422254 RAD21O60216 631 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 COPB2P35606 906 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 KCTD2Q14681 263 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 LRRC41Q15345 812 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 FAM47AQ5JRC9 791 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 IFNL3Q8IZI9 196 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 MKL1Q969V6 931 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 TINF2Q9BSI4 451 aa18.67■□□□□ 0.58
HDAC7-207ENST00000422254 KBTBD13C9JR72 458 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 PRDM1O75626 825 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 TDO2P48775 406 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 TEX13BQ9BXU2 312 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 MTMR4Q9NYA4 1195 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 RIPK3Q9Y572 518 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 PLIN4Q96Q06 1357 aa18.66■□□□□ 0.58
HDAC7-207ENST00000422254 ATP2A1O14983 1001 aa18.65■□□□□ 0.58
HDAC7-207ENST00000422254 ZNF865P0CJ78 1059 aaPredicted RBP18.65■□□□□ 0.58
HDAC7-207ENST00000422254 TAL1P17542 331 aaPredicted RBP18.65■□□□□ 0.58
HDAC7-207ENST00000422254 ZMYM1Q5SVZ6 1142 aa18.65■□□□□ 0.58
HDAC7-207ENST00000422254 ZNF444Q8N0Y2 327 aaPredicted RBP18.65■□□□□ 0.58
HDAC7-207ENST00000422254 PRPF38AQ8NAV1 312 aaKnown RBP18.65■□□□□ 0.58
HDAC7-207ENST00000422254 SYNPO2Q9UMS6 1093 aa18.65■□□□□ 0.58
HDAC7-207ENST00000422254 DNAJC25-GNG10A0A024R161 153 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 FOXP2O15409 715 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 APPP05067 770 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 ADCYAP1R1P41586 468 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 LRRFIP1Q32MZ4 808 aaKnown RBP18.64■□□□□ 0.57
HDAC7-207ENST00000422254 C1orf53Q5VUE5 145 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDAC7-207ENST00000422254 NEDD1Q8NHV4 660 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 ZNF287Q9HBT7 754 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
HDAC7-207ENST00000422254 DNAH12Q6ZR08 3092 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
HDAC7-207ENST00000422254 TRIM60Q495X7 471 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 SNRNP48Q6IEG0 339 aaKnown RBP18.63■□□□□ 0.57
HDAC7-207ENST00000422254 Q7L0L9 218 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
HDAC7-207ENST00000422254 DEFB123Q8N688 67 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 GMCL1P1Q8NEA9 526 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 LBHD1Q9BQE6 289 aaPredicted RBP18.63■□□□□ 0.57
HDAC7-207ENST00000422254 SLC38A10Q9HBR0 1119 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 XPNPEP3Q9NQH7 507 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
HDAC7-207ENST00000422254 TTLL1O95922 423 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 RARBP10826 455 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 MAMDC4Q6UXC1 1216 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 MSL3Q8N5Y2 521 aaKnown RBP18.62■□□□□ 0.57
HDAC7-207ENST00000422254 FERMT2Q96AC1 680 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 FSD1Q9BTV5 496 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
HDAC7-207ENST00000422254 HIP1O00291 1037 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 ADAMTS4O75173 837 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 SNAI1O95863 264 aaPredicted RBP18.61■□□□□ 0.57
HDAC7-207ENST00000422254 PGK1P00558 417 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
HDAC7-207ENST00000422254 SDSP20132 328 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 PPARAQ07869 468 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 CPXCR1Q8N123 301 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 FGD4Q96M96 766 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 NAPBQ9H115 298 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 PDLIM7Q9NR12 457 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 FEM1BQ9UK73 627 aa18.61■□□□□ 0.57
HDAC7-207ENST00000422254 SYNGAP1Q96PV0 1343 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 ZBED4O75132 1171 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 REC8O95072 547 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 AKR1A1P14550 325 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 TFAP4Q01664 338 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 PDE4BQ07343 736 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 SLFN13Q68D06 897 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 SH3RF1Q7Z6J0 888 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 ZNF467Q7Z7K2 595 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-207ENST00000422254 LENG1Q96BZ8 264 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-207ENST00000422254 RAVER2Q9HCJ3 691 aaKnown RBP18.6■□□□□ 0.57
HDAC7-207ENST00000422254 PRKAG2Q9UGJ0 569 aa18.6■□□□□ 0.57
HDAC7-207ENST00000422254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■■■■■ 37.9
HDAC7-207ENST00000422254 MCM3APO60318 1980 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 TRIM43BA6NCK2 446 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 BMP3P12645 472 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 OAZ1P54368 228 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 RNF180Q86T96 592 aa18.59■□□□□ 0.57
HDAC7-207ENST00000422254 TRIM43Q96BQ3 446 aaPredicted RBP18.59■□□□□ 0.57
HDAC7-207ENST00000422254 DDX11Q96FC9 970 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms