RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 FCER1AP12319 257 aa17.52■□□□□ 0.4
LINC01840-201ENST00000421870 COPB2P35606 906 aa17.52■□□□□ 0.4
LINC01840-201ENST00000421870 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.4
LINC01840-201ENST00000421870 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.4
LINC01840-201ENST00000421870 TBC1D10CQ8IV04 446 aa17.52■□□□□ 0.4
LINC01840-201ENST00000421870 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.4
LINC01840-201ENST00000421870 ZBED4O75132 1171 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 MCCP23508 829 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 SLC1A4P43007 532 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 PRPF38BQ5VTL8 546 aaKnown RBP17.51■□□□□ 0.39
LINC01840-201ENST00000421870 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 FAM160B2Q86V87 743 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 ANKLE1Q8NAG6 615 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 CHURC1Q8WUH1 139 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 KIFC2Q96AC6 838 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 TMEM47Q9BQJ4 181 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 TEX13BQ9BXU2 312 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 SLC5A4Q9NY91 659 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 RIPK3Q9Y572 518 aa17.51■□□□□ 0.39
LINC01840-201ENST00000421870 RAD50Q92878 1312 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
LINC01840-201ENST00000421870 STAT2P52630 851 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 OAZ1P54368 228 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 LHX8Q68G74 356 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
LINC01840-201ENST00000421870 RUFY2Q8WXA3 655 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 ESR2Q92731 530 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 OGDHLQ9ULD0 1010 aa17.5■□□□□ 0.39
LINC01840-201ENST00000421870 DIS3Q9Y2L1 958 aaKnown RBP17.5■□□□□ 0.39
LINC01840-201ENST00000421870 CCND3P30281 292 aaPredicted RBP17.49■□□□□ 0.39
LINC01840-201ENST00000421870 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
LINC01840-201ENST00000421870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.49■□□□□ 0.39
LINC01840-201ENST00000421870 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
LINC01840-201ENST00000421870 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
LINC01840-201ENST00000421870 MMP19Q99542 508 aa17.49■□□□□ 0.39
LINC01840-201ENST00000421870 FARP2O94887 1054 aaPredicted RBP17.48■□□□□ 0.39
LINC01840-201ENST00000421870 CYP2C19P33261 490 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 MNX1P50219 401 aaPredicted RBP17.48■□□□□ 0.39
LINC01840-201ENST00000421870 KCTD2Q14681 263 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 ZNF792Q3KQV3 632 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 SNRNP48Q6IEG0 339 aaKnown RBP17.48■□□□□ 0.39
LINC01840-201ENST00000421870 KCTD1Q719H9 257 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 CPXCR1Q8N123 301 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 DCAF4Q8WV16 495 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 RAVER2Q9HCJ3 691 aaKnown RBP17.48■□□□□ 0.39
LINC01840-201ENST00000421870 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
LINC01840-201ENST00000421870 NEDD4P46934 1319 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 SGSM2O43147 1006 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 BTNL9Q6UXG8 535 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 TRPV1Q8NER1 839 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 PRR12Q9ULL5 1215 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 FRMPD3Q5JV73 1810 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 ZNF536O15090 1300 aa17.47■□□□□ 0.39
LINC01840-201ENST00000421870 KDM4AO75164 1064 aa17.46■□□□□ 0.39
LINC01840-201ENST00000421870 PGK2P07205 417 aa17.46■□□□□ 0.39
LINC01840-201ENST00000421870 PTH1RQ03431 593 aa17.46■□□□□ 0.39
LINC01840-201ENST00000421870 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
LINC01840-201ENST00000421870 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
LINC01840-201ENST00000421870 PAWRQ96IZ0 340 aaKnown RBP17.46■□□□□ 0.39
LINC01840-201ENST00000421870 CTDP1Q9Y5B0 961 aaPredicted RBP17.46■□□□□ 0.39
LINC01840-201ENST00000421870 B4E1Z4 1266 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 MSCO60682 206 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 PDHBP11177 359 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 CYBAP13498 195 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 RASGRP2Q7LDG7 609 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 NECAB2Q7Z6G3 386 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 HTATIP2Q9BUP3 242 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 KRT23Q9C075 422 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 FBXO40Q9UH90 709 aa17.45■□□□□ 0.38
LINC01840-201ENST00000421870 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
LINC01840-201ENST00000421870 TTBK2Q6IQ55 1244 aa17.44■□□□□ 0.38
LINC01840-201ENST00000421870 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
LINC01840-201ENST00000421870 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
LINC01840-201ENST00000421870 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
LINC01840-201ENST00000421870 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
LINC01840-201ENST00000421870 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
LINC01840-201ENST00000421870 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
LINC01840-201ENST00000421870 CYP21A2P08686 494 aa17.43■□□□□ 0.38
LINC01840-201ENST00000421870 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
LINC01840-201ENST00000421870 TKFCQ3LXA3 575 aa17.43■□□□□ 0.38
LINC01840-201ENST00000421870 PRAMEF19Q5SWL8 479 aa17.43■□□□□ 0.38
LINC01840-201ENST00000421870 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
LINC01840-201ENST00000421870 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
LINC01840-201ENST00000421870 DIS3LQ8TF46 1054 aaKnown RBP17.43■□□□□ 0.38
LINC01840-201ENST00000421870 DPF3Q92784 378 aa17.43■□□□□ 0.38
LINC01840-201ENST00000421870 RANBP17Q9H2T7 1088 aaKnown RBP17.43■□□□□ 0.38
LINC01840-201ENST00000421870 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms