RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PDHXO00330 501 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 PPFIA3O75145 1194 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 SREBF2Q12772 1141 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 SLC35G1Q2M3R5 365 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 ANKRD23Q86SG2 305 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 CCDC83Q8IWF9 413 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
DDX55-203ENST00000421670 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
DDX55-203ENST00000421670 K7ELQ4 463 aaPredicted RBP18.27■□□□□ 0.52
DDX55-203ENST00000421670 HOXA7P31268 230 aaPredicted RBP18.27■□□□□ 0.52
DDX55-203ENST00000421670 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
DDX55-203ENST00000421670 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
DDX55-203ENST00000421670 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
DDX55-203ENST00000421670 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
DDX55-203ENST00000421670 ASCC2Q9H1I8 757 aaPredicted RBP18.27■□□□□ 0.52
DDX55-203ENST00000421670 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.52
DDX55-203ENST00000421670 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.51
DDX55-203ENST00000421670 CCDC196A0A1B0GTZ2 297 aa18.26■□□□□ 0.51
DDX55-203ENST00000421670 CYTH3O43739 400 aa18.26■□□□□ 0.51
DDX55-203ENST00000421670 DHX16O60231 1041 aaKnown RBP18.26■□□□□ 0.51
DDX55-203ENST00000421670 PABPC4Q13310 644 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDX55-203ENST00000421670 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
DDX55-203ENST00000421670 IFNL1Q8IU54 200 aa18.26■□□□□ 0.51
DDX55-203ENST00000421670 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
DDX55-203ENST00000421670 CPLX1O14810 134 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 CYP2C8P10632 490 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 INHBEP58166 350 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 SNAP25P60880 206 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 PPP2R5BQ15173 497 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 NTRK3Q16288 839 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 FAM160B2Q86V87 743 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 CHURC1Q8WUH1 139 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 PHKBQ93100 1093 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 VAT1LQ9HCJ6 419 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 RBBP6Q7Z6E9 1792 aaKnown RBP18.25■□□□□ 0.51
DDX55-203ENST00000421670 SPDYE16A6NNV3 312 aaPredicted RBP18.25■□□□□ 0.51
DDX55-203ENST00000421670 PLA2G6O60733 806 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 TM4SF4P48230 202 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 GNAQP50148 359 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 COG2Q14746 738 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 PRPF38AQ8NAV1 312 aaKnown RBP18.25■□□□□ 0.51
DDX55-203ENST00000421670 P2RX7Q99572 595 aaKnown RBP18.25■□□□□ 0.51
DDX55-203ENST00000421670 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 SLC45A1Q9Y2W3 748 aa18.25■□□□□ 0.51
DDX55-203ENST00000421670 RBM19Q9Y4C8 960 aaKnown RBP18.25■□□□□ 0.51
DDX55-203ENST00000421670 hCG_1642624A0A1W2PR95 340 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 CTDNEP1O95476 244 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 OSBPP22059 807 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 DSG3P32926 999 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 FUT2Q10981 343 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 LZTS2Q9BRK4 669 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 SPZ1Q9BXG8 430 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
DDX55-203ENST00000421670 PEX10O60683 326 aa18.23■□□□□ 0.51
DDX55-203ENST00000421670 MAP2K2P36507 400 aa18.23■□□□□ 0.51
DDX55-203ENST00000421670 HERVK_113P62684 666 aa18.23■□□□□ 0.51
DDX55-203ENST00000421670 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
DDX55-203ENST00000421670 JAK2O60674 1132 aa18.22■□□□□ 0.51
DDX55-203ENST00000421670 IFNAR1P17181 557 aa18.22■□□□□ 0.51
DDX55-203ENST00000421670 ANP32AP39687 249 aaKnown RBP18.22■□□□□ 0.51
DDX55-203ENST00000421670 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
DDX55-203ENST00000421670 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
DDX55-203ENST00000421670 POTEEQ6S8J3 1075 aa18.22■□□□□ 0.51
DDX55-203ENST00000421670 NSUN7Q8NE18 718 aaKnown RBP18.22■□□□□ 0.51
DDX55-203ENST00000421670 SMCR8Q8TEV9 937 aaPredicted RBP18.22■□□□□ 0.51
DDX55-203ENST00000421670 PIGSQ96S52 555 aa18.22■□□□□ 0.51
DDX55-203ENST00000421670 PARK7Q99497 189 aaKnown RBP18.22■□□□□ 0.51
DDX55-203ENST00000421670 MYPNQ86TC9 1320 aa18.22■□□□□ 0.51
DDX55-203ENST00000421670 VWA5AO00534 786 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
DDX55-203ENST00000421670 OTUD7BQ6GQQ9 843 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
DDX55-203ENST00000421670 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 RANBP17Q9H2T7 1088 aaKnown RBP18.21■□□□□ 0.51
DDX55-203ENST00000421670 SLC38A10Q9HBR0 1119 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 ZCCHC17Q9NP64 241 aaKnown RBP18.21■□□□□ 0.51
DDX55-203ENST00000421670 HOXC10Q9NYD6 342 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 CDKL5O76039 1030 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 CUL4AQ13619 759 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 CCDC174Q6PII3 467 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 ADAMTS5Q9UNA0 930 aa18.21■□□□□ 0.51
DDX55-203ENST00000421670 ZSWIM8A7E2V4 1837 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 FMNL1O95466 1100 aaPredicted RBP18.2■□□□□ 0.5
DDX55-203ENST00000421670 SMARCA1P28370 1054 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 CRHR2Q13324 411 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 QRICH1Q2TAL8 776 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 LBX2Q6XYB7 198 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 REM2Q8IYK8 340 aaPredicted RBP18.2■□□□□ 0.5
DDX55-203ENST00000421670 REPS2Q8NFH8 660 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms