RNA–Protein interactions for RNA: ENST00000420940.6

WDR48-203, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 3,772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-203ENST00000420940 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 DEXIO95424 95 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 ERCC5P28715 1186 aaPredicted RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 PPP4CP60510 307 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 BMS1Q14692 1282 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 POSTNQ15063 836 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 PRR5LQ6MZQ0 368 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 DDX4Q9NQI0 724 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 FEZ2Q9UHY8 353 aaPredicted RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 SHOX2O60902 331 aaPredicted RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 GNAT2P19087 354 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 SFPQP23246 707 aaKnown RBP eCLIP6.55□□□□□ -1.36
WDR48-203ENST00000420940 POLD1P28340 1107 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 SYKP43405 635 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.36
WDR48-203ENST00000420940 GPSM2P81274 684 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 PLCB2Q00722 1185 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 DIXDC1Q155Q3 683 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 MIIPQ5JXC2 388 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 SPECC1LQ69YQ0 1117 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 WDR93Q6P2C0 686 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 DAGLBQ8NCG7 672 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 DUSP9Q99956 384 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 LIMA1Q9UHB6 759 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 LAMA3Q16787 3333 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 MGAMO43451 1857 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 USP34Q70CQ2 3546 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 COL11A1P12107 1806 aaPredicted RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 USP17L3A6NCW0 530 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 USP17L4A6NCW7 530 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 SYF2O95926 243 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 CYP7A1P22680 504 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 CDC25AP30304 524 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 IARSP41252 1262 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 RAD51AP2Q09MP3 1159 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 MFSD6Q6ZSS7 791 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 USP17L1Q7RTZ2 530 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 KRI1Q8N9T8 703 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 KRT23Q9C075 422 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 CPVLQ9H3G5 476 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
WDR48-203ENST00000420940 ZCCHC17Q9NP64 241 aaKnown RBP6.55□□□□□ -1.36
WDR48-203ENST00000420940 MAGEB6P1A0A0J9YX57 407 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 SOWAHDA6NJG2 315 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 POLRMTO00411 1230 aaKnown RBP6.54□□□□□ -1.36
WDR48-203ENST00000420940 IFIT3O14879 490 aaKnown RBP6.54□□□□□ -1.36
WDR48-203ENST00000420940 UBASH3AP57075 661 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 MTMR8Q96EF0 704 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 CARD6Q9BX69 1037 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 NAPBQ9H115 298 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 CABP5Q9NP86 173 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 JAG2Q9Y219 1238 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 CCDC151A5D8V7 595 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 RCCD1A6NED2 376 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 AGPSO00116 658 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 ZNF263O14978 683 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 MFAP3LO75121 409 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 TXLNAP40222 546 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 MAP3K12Q12852 859 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 MEA1Q16626 185 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 RTN1Q16799 776 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 FGFBP2Q9BYJ0 223 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 PCDHA2Q9Y5H9 948 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 ATRNL1Q5VV63 1379 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 OPLAHO14841 1288 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 DDAH1O94760 285 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 RRP1BQ14684 758 aaKnown RBP6.54□□□□□ -1.36
WDR48-203ENST00000420940 GRM4Q14833 912 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 WTAPQ15007 396 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 TRAPPC11Q7Z392 1133 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 UPF1Q92900 1129 aaKnown RBP eCLIP6.54□□□□□ -1.365e-9■■■■□ 26.4
WDR48-203ENST00000420940 FBXW7Q969H0 707 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 MTMR9Q96QG7 549 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 SLC12A7Q9Y666 1083 aa6.54□□□□□ -1.36
WDR48-203ENST00000420940 HOXA10P31260 410 aaPredicted RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 HSPA1LP34931 641 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 NOP2P46087 812 aaKnown RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 MLKLQ8NB16 471 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 GLIS3Q8NEA6 775 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 RASGRP4Q8TDF6 673 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 FAM163AQ96GL9 167 aaPredicted RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 DNAJC7Q99615 494 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 BAG1Q99933 345 aaPredicted RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 V9GY48 417 aaPredicted RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 GPR75-ASB3A0A0A6YYF3 556 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 GOLGA6L4A6NEF3 574 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 ADKP55263 362 aaKnown RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 SSRP1Q08945 709 aaKnown RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 C16orf86Q6ZW13 317 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 SH3BP5LQ7L8J4 393 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 CCDC82Q8N4S0 544 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 NUDT12Q9BQG2 462 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 KCNQ5Q9NR82 932 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 EPHB6O15197 1021 aa6.53□□□□□ -1.36
WDR48-203ENST00000420940 RPS8P62241 208 aaKnown RBP6.53□□□□□ -1.36
WDR48-203ENST00000420940 RBL2Q08999 1139 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms